| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 761080 | 37 (0.710) | 3 (0.060) | 3/94 | NT | 7.5% | coding (1005/1047 nt) | potD | polyamine transporter subunit |
| ? | minE | = 761099 | 40 (0.840) | coding (986/1047 nt) | potD | polyamine transporter subunit | |||||
GCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/761032‑761080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgACGTTGGCGCAGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAATTCAGC < minE/761099‑761032 GCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGACGTTGGCGCAGCCAGCAGC < 1:929873/69‑1 TGCTTTCAGCTTCTGATAATACTCTTCATAAATGACGTTGGCGCAGCCAGCAGCA > 1:3872917/1‑55 TCTGATAATACTCTTCATAAATGACGTTGGCGCAGCCAGCAGCATT > 1:3789249/1‑46 ATGACGTTGGCGCAGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAATTCAG > 1:490812/1‑70 TGACGTTGGCGCAGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAATTCAGC > 1:200975/1‑70 TGACGTTGGCGCAGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGT < 1:102668/61‑1 GCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/761032‑761080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgACGTTGGCGCAGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAATTCAGC < minE/761099‑761032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |