| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 761080 | 37 (0.710) | 3 (0.060) | 3/94 | NT | 7.5% | coding (1005/1047 nt) | potD | polyamine transporter subunit |
| ? | minE | = 761099 | 40 (0.840) | coding (986/1047 nt) | potD | polyamine transporter subunit | |||||
GGTAATACCACCGCCCGCTTGCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCGGGTAGAGTGT > minE/761012‑761148 | ggTAATACCACCGCCCGCTTGCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAAtgct > 1:2119751/1‑71 (MQ=255) aTACCACCGCCCGCTTGCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGctgctg > 1:3747795/1‑71 (MQ=255) ccgcTTGCTGAATTAACGTCCTGCTTTCAGCTTCAGATAATACTCTTCATAAATGCTGCTGGCTGCGCCaa > 1:3927812/1‑71 (MQ=255) gCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGacgttggcgcagccagcagc < 1:929873‑M1/69‑21 (MQ=255) gCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTca > 1:200975‑M2/1‑68 (MQ=255) cTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTcat > 1:490812‑M2/1‑67 (MQ=255) gAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAAtgctg < 1:888536/49‑1 (MQ=255) aaTTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTc < 1:622699/69‑1 (MQ=255) ttAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGcc < 1:3688367/71‑1 (MQ=255) ttAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGc > 1:1620628/1‑70 (MQ=255) ttAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGc > 1:201505/1‑70 (MQ=255) aCGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTgctgg < 1:471564/47‑1 (MQ=255) aCGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTca < 1:102668‑M2/61‑3 (MQ=255) aCGTCCTGCTTTCAGCTTCTGATAATACTCTTCAAAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCAt < 1:2573814/70‑1 (MQ=255) cTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGcc < 1:2688112/70‑1 (MQ=255) tGCTTTCAGCTTCTGATAATACTCTTCATAAATGacgttggcgcagccagcagca > 1:3872917‑M1/1‑34 (MQ=255) tGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCAt > 1:2065123/1‑71 (MQ=255) gCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCAtt > 1:833722/1‑71 (MQ=255) cTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCAttt > 1:1260424/1‑71 (MQ=255) cTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCAt < 1:53792/69‑1 (MQ=255) tCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCAtttt > 1:634102/1‑69 (MQ=255) tCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCAtttt > 1:285031/1‑69 (MQ=255) tCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCCCCAttttt < 1:2088484/70‑1 (MQ=255) cAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTaa > 1:3607957/1‑71 (MQ=255) tCTGATAATACTCTTCATAAATGacgttggcgcagccagcagcatt > 1:3789249‑M1/1‑23 (MQ=255) tCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGcc < 1:649870/51‑1 (MQ=255) ataataCTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCa > 1:999333/1‑55 (MQ=255) ataataCTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGttt < 1:3643459/68‑1 (MQ=255) ataataCTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGttt < 1:2944596/68‑1 (MQ=255) ataataCTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTc < 1:326124/69‑1 (MQ=255) taataCTCTTCATAAATGCTGCTGGCTGCGCCAACGt < 1:1175278/37‑1 (MQ=255) aCTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATcc > 1:2230132/1‑71 (MQ=255) aCTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATcc > 1:2813795/1‑71 (MQ=255) ctctTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCg > 1:3141273/1‑71 (MQ=255) ctctTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCg < 1:570562/71‑1 (MQ=255) tctTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCgg > 1:739644/1‑71 (MQ=255) ctTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCAtttt < 1:1609475/51‑1 (MQ=255) ttCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCgg < 1:2812796/69‑1 (MQ=255) cATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCAt > 1:3371621/1‑38 (MQ=255) cATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAAt > 1:2278375/1‑52 (MQ=255) cATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCggg > 1:652131/1‑68 (MQ=255) cATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCggg > 1:2928286/1‑68 (MQ=255) aTAAATGCTGCTGGCTGCGCCAACGTCATTCTGGCATTCGCCATTTTTAATGGTTTCAGCATCCGGGTa > 1:1937587/1‑69 (MQ=255) aTAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCGGGTa > 1:3923174/1‑69 (MQ=255) aTAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCGGGTa < 1:1441279/69‑1 (MQ=255) aaTGCTGCTGGCTGCGCCAACGTcatttatgaagagtattatcaga > 1:3789249‑M2/1‑23 (MQ=255) aaTGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCGGGTAGAgtg < 1:2253708/71‑1 (MQ=255) aTGacgttggcgcagccagcagcatttatgaagagtattatcagaagctgaaagcaggacgttaattcag > 1:490812‑M1/1‑3 (MQ=255) tgctgcTGGCTGCGCCAACGTcatttatgaagagtattatcagaagctgaaagca > 1:3872917‑M2/1‑21 (MQ=255) tGacgttggcgcagccagcagcatttatgaagagtattatcagaagctgaaagcaggacgttaattcagc > 1:200975‑M1/1‑2 (MQ=255) tGacgttggcgcagccagcagcatttatgaagagtattatcagaagctgaaagcaggacgt < 1:102668‑M1/61‑60 (MQ=255) gctgctGGCTGCGCCAACGTcatttatgaagagtattatcagaagctgaaagcaggacgttaattcagc < 1:929873‑M2/69‑50 (MQ=255) | GGTAATACCACCGCCCGCTTGCTGAATTAACGTCCTGCTTTCAGCTTCTGATAATACTCTTCATAAATGCTGCTGGCTGCGCCAACGTCATTCTGCCATTCGCCATTTTTAATGGTTTCAGCATCCGGGTAGAGTGT > minE/761012‑761148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |