| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1280403 | 42 (0.810) | 6 (0.130) | 3/88 | NT | 12.5% | coding (2182/7104 nt) | yeeJ | adhesin |
| ? | minE | = 1280416 | 48 (1.070) | coding (2195/7104 nt) | yeeJ | adhesin | |||||
CTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1280339‑1280403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcaaaTCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTATAGGTCG < minE/1280416‑1280347 CTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCA > 1:3791480/1‑63 GGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAATCTTCATTCCAG < 1:935911/71‑1 GGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAATCTTCATTCCAG < 1:3420881/71‑1 ATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAATCTTCATTCCAGTTTTGC > 1:3928502/1‑69 ATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAATCTTCATTCCAGTTTTGC > 1:3384450/1‑69 ACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCA < 1:1488536/47‑1 CCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAATCTTCATTCCAGTTTT > 1:1207213/1‑61 CCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAATCTTCATTCCAGTTTT > 1:1329141/1‑61 ACCAAAGGCAGTGGACTTACTGCGAAGCTATTAAT > 1:2479043/1‑35 TGCAAATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTA > 1:2251587/1‑69 TGCAAATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTT < 1:2719112/55‑1 CAAATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTATAG > 1:2504922/1‑70 AAATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTATAGGT < 1:3828465/71‑1 AAATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTATAGGT < 1:2761678/71‑1 AAATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACT < 1:1511546/47‑1 AAATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCA < 1:1509312/45‑1 AATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGG < 1:1022403/63‑1 AATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAG < 1:2599782/59‑1 AATCTTAATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTAT > 1:2215641/1‑66 ATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTATAGGTCG > 1:2757847/1‑71 ATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTATAGGTCG > 1:1971791/1‑71 ATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATA > 1:345763/1‑57 ATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGT > 1:1373440/1‑36 ATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGT > 1:388127/1‑36 ATCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGT > 1:1674428/1‑36 CTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1280339‑1280403‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcaaaTCTTCATTCCAGTTTTGCATTAATAGCTTCGCAGTAAGTCCACTGCCTTTGGTATAGGCGGTATAGGTCG < minE/1280416‑1280347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |