| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1280403 | 42 (0.810) | 6 (0.130) | 3/88 | NT | 12.5% | coding (2182/7104 nt) | yeeJ | adhesin |
| ? | minE | = 1280416 | 48 (1.070) | coding (2195/7104 nt) | yeeJ | adhesin | |||||
CGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGCGAC > minE/1280336‑1280473 | cGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACt < 1:2716370/71‑1 (MQ=255) gTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTg < 1:2751924/71‑1 (MQ=255) tataAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCaaaa > 1:2144480/1‑65 (MQ=255) tataAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTgg < 1:1554339/69‑1 (MQ=255) aGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg > 1:2856601/1‑69 (MQ=255) aGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg > 1:1836942/1‑69 (MQ=255) ggCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAtcttcattccag < 1:935911‑M1/71‑13 (MQ=255) ggCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAtcttcattccag < 1:3420881‑M1/71‑13 (MQ=255) gCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg > 1:253760/1‑67 (MQ=255) gCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg > 1:1651451/1‑67 (MQ=255) cGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAt > 1:2757847‑M2/1‑70 (MQ=255) cGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAt > 1:1971791‑M2/1‑70 (MQ=255) aCCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAttt < 1:2761678‑M2/71‑4 (MQ=255) aCCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAttt < 1:3828465‑M2/71‑4 (MQ=255) cTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtttg > 1:2504922‑M2/1‑66 (MQ=255) tataCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg < 1:2045488/61‑1 (MQ=255) ataCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAtcttcattccagttttgc > 1:3384450‑M1/1‑51 (MQ=255) ataCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAtcttcattccagttttgc > 1:3928502‑M1/1‑51 (MQ=255) ataCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATTAAGAtt > 1:2215641‑M2/1‑64 (MQ=255) taCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtttgca > 1:2251587‑M2/1‑63 (MQ=255) taCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATa > 1:703593/1‑71 (MQ=255) ccGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt < 1:1022403‑M2/63‑3 (MQ=255) gCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGa < 1:142569/59‑1 (MQ=255) gCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGa < 1:2190886/59‑1 (MQ=255) gCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGa < 1:1185647/59‑1 (MQ=255) ccTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAtcttcattccagtttt > 1:1329141‑M1/1‑45 (MQ=255) ccTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAtcttcattccagtttt > 1:1207213‑M1/1‑45 (MQ=255) cTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt < 1:2599782‑M2/59‑3 (MQ=255) tataCCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAt > 1:345763‑M2/1‑56 (MQ=255) tataCCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTg > 1:5566/1‑70 (MQ=255) aCCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGAtt > 1:2063506/1‑71 (MQ=255) aCCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGAtt > 1:3437265/1‑71 (MQ=255) cAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTa < 1:3053253/71‑1 (MQ=255) aaaGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGa < 1:3250731/43‑1 (MQ=255) aaGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtttgca < 1:2719112‑M2/55‑7 (MQ=255) gCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTatcatc < 1:969481/71‑1 (MQ=255) aGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAttt < 1:1511546‑M2/47‑4 (MQ=255) tGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAttt < 1:1509312‑M2/45‑4 (MQ=255) ggACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGAtt < 1:477926/59‑1 (MQ=255) gACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTa > 1:3513113/1‑60 (MQ=255) gACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGc < 1:1033032/70‑1 (MQ=255) tACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTatcatc < 1:2696323/61‑1 (MQ=255) aCTGCGAAGCTATTAATGCAAAACTGGAATGAAGAt > 1:1674428‑M2/1‑35 (MQ=255) aCTGCGAAGCTATTAATGCAAAACTGGAATGAAGAt > 1:388127‑M2/1‑35 (MQ=255) aCTGCGAAGCTATTAATGCAAAACTGGAATGAAGAt > 1:1373440‑M2/1‑35 (MQ=255) aCTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAAccc > 1:1012105/1‑71 (MQ=255) gCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCg > 1:1150138/1‑69 (MQ=255) cGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAg > 1:3532028/1‑71 (MQ=255) gAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGcc < 1:2449445/61‑1 (MQ=255) gAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGt < 1:2309646/71‑1 (MQ=255) aGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGa > 1:449442/1‑55 (MQ=255) aGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGt > 1:875638/1‑69 (MQ=255) tATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGc > 1:3332300/1‑70 (MQ=255) aTTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTatcatc < 1:2046096/49‑1 (MQ=255) aTTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTat > 1:2766877/1‑45 (MQ=255) aTTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCg > 1:1528064/1‑70 (MQ=255) ttAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGa > 1:3031011/1‑70 (MQ=255) ttAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGa < 1:259734/70‑1 (MQ=255) aaTGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTat < 1:134288/42‑1 (MQ=255) aaTGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGa < 1:3193799/48‑1 (MQ=255) aaTGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGa < 1:3189745/48‑1 (MQ=255) aTGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTatcatc < 1:2268453/45‑1 (MQ=255) aTGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGaaaa < 1:2038888/70‑1 (MQ=255) aTGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGaaaa < 1:2907136/70‑1 (MQ=255) aTGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAAt > 1:1007762/1‑71 (MQ=255) tGCAAAtcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcggta > 1:2251587‑M1/1‑6 (MQ=255) tGCAAAtcttcattccagttttgcattaatagcttcgcagtaagtccactgcctt < 1:2719112‑M1/55‑50 (MQ=255) tGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTatca < 1:2408140/42‑1 (MQ=255) tGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACg > 1:2893607/1‑48 (MQ=255) tGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAAtt < 1:945444/71‑1 (MQ=255) gCAAAACTGGAATGAAGAtttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtat > 1:3928502‑M2/1‑18 (MQ=255) gCAAAACTGGAATGAAGAtttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtat > 1:3384450‑M2/1‑18 (MQ=255) cAAAtcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtatag > 1:2504922‑M1/1‑4 (MQ=255) cAAAACTGGAATGAAGATTTGCATACCGCTGGATTTa > 1:2911854/1‑37 (MQ=255) cAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGc < 1:2888138/71‑1 (MQ=255) cAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGc < 1:1872065/71‑1 (MQ=255) cAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGc < 1:1813532/71‑1 (MQ=255) aaatcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtataggt < 1:3828465‑M1/71‑69 (MQ=255) aaatcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtataggt < 1:2761678‑M1/71‑69 (MQ=255) aaatcttcattccagttttgcattaatagcttcgcagtaagtccact < 1:1511546‑M1/47‑45 (MQ=255) aaatcttcattccagttttgcattaatagcttcgcagtaagtcca < 1:1509312‑M1/45‑43 (MQ=255) aaaaCTGGAATGAAGAtttgcattaatagcttcgcagtaagtccactgcctttggtatagg > 1:1207213‑M2/1‑16 (MQ=255) aaaaCTGGAATGAAGAtttgcattaatagcttcgcagtaagtccactgcctttggtatagg > 1:1329141‑M2/1‑16 (MQ=255) aatcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcgg < 1:1022403‑M1/63‑62 (MQ=255) aatcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtatag < 1:2599782‑M1/59‑58 (MQ=255) aatcttaattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtat > 1:2215641‑M1/1‑2 (MQ=255) aaaCTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAAccc > 1:1370546/1‑51 (MQ=255) aaaCTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAAccc > 1:2971819/1‑51 (MQ=255) atcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtataggtcg > 1:2757847‑M1/1‑1 (MQ=255) atcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtataggcggtataggtcg > 1:1971791‑M1/1‑1 (MQ=255) atcttcattccagttttgcattaatagcttcgcagtaagtccactgcctttggtata > 1:345763‑M1/1‑1 (MQ=255) atcttcattccagttttgcattaatagcttcgcagt > 1:388127‑M1/1‑1 (MQ=255) atcttcattccagttttgcattaatagcttcgcagt > 1:1373440‑M1/1‑1 (MQ=255) atcttcattccagttttgcattaatagcttcgcagt > 1:1674428‑M1/1‑1 (MQ=255) | CGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGCGAC > minE/1280336‑1280473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |