New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 1435980 = | 60 (1.160) | 5 (0.130) +TGTGGTGGTGGC |
4/78 | NT | 8.1% | coding (188/1644 nt) | yojI | fused predicted multidrug transport subunits and membrane component and ATP‑binding component of ABC superfamily |
? | minE | = 2059288 | 88 (1.700) | coding (552/1464 nt) | ygjE | predicted tartrate:succinate antiporter |
ATTGCTGCTGTTGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1435997‑1435980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGTCGTTTGGTTGTGAT < minE/2059288‑2059270 |||||||||||| cgTGCTGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGGTCGT < 1:1775089/44‑1 TGCTGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGGTCGTGA > 1:1624142/1‑46 TGCTGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGG < 1:561136/40‑1 GCTGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGGTCGTG < 1:1302651/44‑1 TGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGGTCGTGAT > 1:1757071/1‑44 |||||||||||| ATTGCTGCTGTTGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1435997‑1435980 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGTCGTTTGGTTGTGAT < minE/2059288‑2059270 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |