| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1435980 = | 60 (1.160) | 5 (0.130) +TGTGGTGGTGGC |
4/78 | NT | 8.1% | coding (188/1644 nt) | yojI | fused predicted multidrug transport subunits and membrane component and ATP‑binding component of ABC superfamily |
| ? | minE | = 2059288 | 88 (1.700) | coding (552/1464 nt) | ygjE | predicted tartrate:succinate antiporter | |||||
Only 100 of 101 total aligned reads displayed.
GGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTT > minE/2059220‑2059358 | ggtgCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGAcagcag > 1:55626/1‑71 (MQ=255)ggtgCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGAcagcag > 1:3554895/1‑71 (MQ=255) ggggATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTcgc > 1:3897166/1‑71 (MQ=255) gggATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTcgc < 1:3690036/70‑1 (MQ=255) gggATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTcg < 1:1240395/69‑1 (MQ=255) ttATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCgcag > 1:3043573/1‑70 (MQ=255) tatctatcCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTcgc > 1:2220451/1‑65 (MQ=255) atctatcCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGtt > 1:232269/1‑61 (MQ=255) atctatcCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCgcagca < 1:1990731/70‑1 (MQ=255) tctatcCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCAtt > 1:1156251/1‑71 (MQ=255) tctatcCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCAt < 1:3064696/70‑1 (MQ=255) tctatcCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCAt < 1:1551116/70‑1 (MQ=255) tatcCCATCATCCGTACCCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGtt < 1:3163180/58‑1 (MQ=255) tcCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGc < 1:3589000/70‑1 (MQ=255) ccATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCgca > 1:1149232/1‑60 (MQ=255) ccATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCg < 1:137455/71‑1 (MQ=255) atcatcCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGt > 1:2502516/1‑70 (MQ=255) tcatcCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTa > 1:2285006/1‑70 (MQ=255) atcCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCg < 1:2354107/66‑1 (MQ=255) atcCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCg < 1:1770116/66‑1 (MQ=255) atcCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTAcat < 1:2317405/71‑1 (MQ=255) atcCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTAca > 1:2344234/1‑70 (MQ=255) tcCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTAcatc < 1:2739001/71‑1 (MQ=255) ccGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCgca < 1:2721592/53‑1 (MQ=255) ccGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCAtt > 1:3072378/1‑58 (MQ=255) ccGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCAtt > 1:955445/1‑58 (MQ=255) ccGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTAGCGCAGCATTGGCTCGTAcatca > 1:3564721/1‑71 (MQ=255) cGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCAtt > 1:3828914/1‑57 (MQ=255) cGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTAcatcat < 1:1160657/71‑1 (MQ=255) tAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCAtgt < 1:2163524/71‑1 (MQ=255) aaCCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCAtgtg > 1:2866600/1‑71 (MQ=255) aCCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGt > 1:3082285/1‑60 (MQ=255) ccTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCTCGCAGCATTGGCTCGTACATCAAGTGGa > 1:2499721/1‑71 (MQ=255) ccTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGa < 1:1595474/71‑1 (MQ=255) cTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGAt < 1:1093824/71‑1 (MQ=255) cTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGAt < 1:694875/71‑1 (MQ=255) aCCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGa > 1:2602944/1‑71 (MQ=255) ccGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTa > 1:2942773/1‑53 (MQ=255) ccGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAt > 1:3320936/1‑71 (MQ=255) cGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt > 1:1656202/1‑71 (MQ=255) cGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt < 1:1800002/71‑1 (MQ=255) cGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt > 1:590793/1‑71 (MQ=255) cGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt > 1:1660927/1‑71 (MQ=255) cGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt > 1:1150268/1‑71 (MQ=255) cGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt > 1:807078/1‑71 (MQ=255) cGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAt < 1:3335940/70‑1 (MQ=255) gCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTg > 1:2251527/1‑44 (MQ=255) gCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGc > 1:1353289/1‑46 (MQ=255) gCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAttg < 1:465943/71‑1 (MQ=255) ctctATCTATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt < 1:1292545/69‑1 (MQ=255) ctATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAttgttg > 1:899016/1‑71 (MQ=255) atcaatcaCAACCAAACGAGAGCAGTTCGCGCAGCATTGGGTGGTAca < 1:2788760/48‑1 (MQ=37) atcaatcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGcc > 1:649406/1‑71 (MQ=255) tcaatcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATgg > 1:2818643/1‑59 (MQ=255) tcaatcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAttgttg < 1:3522738/68‑1 (MQ=255) tcaatcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGcc > 1:2156912/1‑70 (MQ=255) tcaatcaCAACCAAACGAAAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGcc > 1:2075409/1‑70 (MQ=255) caatcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGa < 1:3652561/55‑1 (MQ=255) caatcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGa < 1:1140865/61‑1 (MQ=255) caatcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGa > 1:2124782/1‑71 (MQ=255) atcaCGACCAAACGACAGCgccaccaccacagccatcaacagca > 1:1757071‑M2/1‑19 (MQ=255) tcaCGACCAAACGACAGCgccaccaccacagccatcaacagcagca > 1:1624142‑M2/1‑18 (MQ=255) tcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACt > 1:630458/1‑70 (MQ=255) tcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTg > 1:2639523/1‑71 (MQ=255) tcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTg > 1:3505218/1‑71 (MQ=255) tcaCAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTg > 1:448130/1‑71 (MQ=255) cacgACCAAACGACAGCgccaccaccacagccatcaacagcagc < 1:1302651‑M2/44‑28 (MQ=255) acgACCAAACGACAGCgccaccaccacagccatcaacagcagcacg < 1:1775089‑M2/46‑31 (MQ=255) acaACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGAt < 1:767262/51‑1 (MQ=255) acaACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGAc > 1:760606/1‑67 (MQ=255) acaACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGc < 1:732992/70‑1 (MQ=255) acaACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGc < 1:3856513/70‑1 (MQ=255) acaACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCg > 1:3035394/1‑71 (MQ=255) caACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCAtgtg < 1:3465385/47‑1 (MQ=255) caACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCAtgtg < 1:633057/47‑1 (MQ=255) caACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGt > 1:3564243/1‑71 (MQ=255) caACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGt > 1:1079279/1‑71 (MQ=255) aCCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTAcatcat < 1:3675988/42‑1 (MQ=255) aCCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGCCTGCGTGa > 1:3267374/1‑71 (MQ=255) ccAAACGACAGCgccaccaccacagccatcaacagcagca < 1:561136‑M2/40‑29 (MQ=255) ccAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGAc > 1:1756465/1‑71 (MQ=255) ccAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGAc > 1:815656/1‑71 (MQ=255) ccAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGAc > 1:3111824/1‑71 (MQ=255) ccAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGAc > 1:66813/1‑71 (MQ=255) ccAAACGACAGCAGTTCGCGCACCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGAc > 1:3630050/1‑71 (MQ=255) aaaCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGAc > 1:2471086/1‑69 (MQ=255) aaaCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCa < 1:1049308/71‑1 (MQ=255) aaaCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCa < 1:3644330/71‑1 (MQ=255) aaaCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCa < 1:1337876/71‑1 (MQ=255) aaaCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCa < 1:3610957/71‑1 (MQ=255) aaCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAg > 1:3814490/1‑71 (MQ=255) aaCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAg < 1:1140122/71‑1 (MQ=255) aCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAgc > 1:1233515/1‑71 (MQ=255) aCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAgc > 1:3060549/1‑71 (MQ=255) aCGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAg < 1:1926504/70‑1 (MQ=255) gACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAgcgc < 1:2000631/71‑1 (MQ=255) agcagTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGa > 1:134294/1‑53 (MQ=255) gcagTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGAtt < 1:3700298/44‑1 (MQ=255) cagTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCAttt < 1:2626179/71‑1 (MQ=255) cagTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCAttt > 1:1405276/1‑71 (MQ=255) | GGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTT > minE/2059220‑2059358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |