New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE = 145650446 (0.890)5 (0.110) 3/90 NT 11.8% coding (846/1650 nt) yfaQ hypothetical protein
?minE = 1456521 34 (0.740)coding (829/1650 nt) yfaQ hypothetical protein

GGTCGTCTCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/1456429‑1456504
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtacgACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGACGTTTACTAATGGTAACCACATTACGT  <  minE/1456521‑1456452
                                                                                                                                                  
GGTCGTCTCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAA                                                                             <  1:3777012/71‑1
 GTCGTCTCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAG                                                                            <  1:879012/71‑1
 GTCGTCTCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAA                                                                             <  1:216234/70‑1
 GTCGTCCCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAG                                                                            <  1:3476573/71‑1
         ACCGTGGCTGACAAACTTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACtcc                                                                      <  1:1480809/69‑4
          CCGTGGCTGACAAACTTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACtcc                                                                      <  1:1476107/68‑4
             TGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAG                                                                            >  1:1331261/1‑59
             TGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAG                                                                            >  1:3782240/1‑59
                  GACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAG                                                                            >  1:1691744/1‑54
                  GACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAG                                                                            >  1:2339694/1‑54
                     AAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGACGGCAGTAAATCC                                                          <  1:2226702/69‑1
                             TGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGACGGCAGT                                                                >  1:3295512/1‑55
                               TGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGACGGCAGTAAATCCCGGCG                                                     <  1:1517164/64‑1
                                                 GTCACACGATAGCGCCCATTAAGTACGACGGCAGTAAATCC                                                          <  1:1559342/41‑1
                                                 GTCACACGATAGCGCCCATTAAGTACGACGGCAGTAAATCC                                                          <  1:1240606/41‑1
                                                                        TACGACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGACGTTTACTAATGGTAACCACA        <  1:371448/68‑1
                                                                         ACGACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGACGTTTACTAATGGTAACCACATTAC    >  1:1124264/1‑71
                                                                         ACGACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGA                             >  1:3331270/1‑46
                                                                         ACGACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGA                             >  1:876168/1‑46
                                                                           GACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGACGTTTACTAATGGTAACCACATTACGT  <  1:1436039/71‑1
                                                                                                                                                  
GGTCGTCTCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/1456429‑1456504
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtacgACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGACGTTTACTAATGGTAACCACATTACGT  <  minE/1456521‑1456452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.