| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1456504 | 46 (0.890) | 5 (0.110) | 3/90 | NT | 11.8% | coding (846/1650 nt) | yfaQ | hypothetical protein |
| ? | minE | = 1456521 | 34 (0.740) | coding (829/1650 nt) | yfaQ | hypothetical protein | |||||
TCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGCAAACAGCTCCA > minE/1456436‑1456574 | tcACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGcc > 1:2022402/1‑71 (MQ=255) cACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCg > 1:2789078/1‑71 (MQ=255) aCCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGcc < 1:3463225/69‑1 (MQ=255) aCCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGcc < 1:624897/69‑1 (MQ=255) aCCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGc < 1:3114272/68‑1 (MQ=255) aCCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCgg > 1:1668706/1‑71 (MQ=255) ccGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGcc < 1:1165548/68‑1 (MQ=255) ccGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCggg < 1:1965880/71‑1 (MQ=255) gTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCg > 1:810588/1‑67 (MQ=255) gTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCg > 1:271048/1‑67 (MQ=255) tGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGAtt < 1:2618341/71‑1 (MQ=255) gCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGAttt < 1:825378/70‑1 (MQ=255) gCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGAttt < 1:2484541/70‑1 (MQ=255) gCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTa < 1:3503261/71‑1 (MQ=255) cTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTAc < 1:1344200/71‑1 (MQ=255) gACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTg > 1:3034856/1‑71 (MQ=255) aCAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTAc < 1:3269717/68‑1 (MQ=255) aCAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGc > 1:1592772/1‑71 (MQ=255) cAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGcc > 1:1478927/1‑71 (MQ=255) cAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGcc > 1:3130432/1‑71 (MQ=255) taaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGAtt < 1:1741804/62‑1 (MQ=255) aaaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGacggcagtaaatcc < 1:2226702‑M1/69‑15 (MQ=255) aaaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCcg > 1:2560261/1‑71 (MQ=255) aaaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCcg < 1:657312/71‑1 (MQ=255) aaaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCcg < 1:1444955/71‑1 (MQ=255) aaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTa > 1:161940/1‑64 (MQ=255) aaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCcgt < 1:1569534/71‑1 (MQ=255) aaCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCcgt < 1:1265468/71‑1 (MQ=255) aCGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTc < 1:1436039‑M2/71‑2 (MQ=255) gTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTcgt > 1:1124264‑M2/1‑68 (MQ=255) aTGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGAt > 1:1776258/1‑55 (MQ=255) tgtgGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGacggcagt > 1:3295512‑M1/1‑47 (MQ=255) tgtgGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTcgta < 1:371448‑M2/68‑5 (MQ=255) tgGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGacggcagtaaatcccggcg < 1:1517164‑M1/64‑20 (MQ=255) aCCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTcc < 1:2241650/70‑1 (MQ=255) aCCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCg > 1:1479651/1‑71 (MQ=255) ccATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCg < 1:2867089/70‑1 (MQ=255) cATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCt < 1:3248335/71‑1 (MQ=255) cATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCt < 1:2596619/71‑1 (MQ=255) ttAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCtgt < 1:1560902/71‑1 (MQ=255) ttAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCtgt > 1:3326186/1‑71 (MQ=255) ttAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCtgt < 1:713231/71‑1 (MQ=255) aGTAAACGTCACACGATAGCGCCCATTAAGTACGc > 1:1938005/1‑35 (MQ=255) aGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGa > 1:2616326/1‑71 (MQ=255) tAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGAttt < 1:774747/41‑1 (MQ=255) tAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGAttt < 1:2458311/41‑1 (MQ=255) aCGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTttc < 1:993199/71‑1 (MQ=255) aCGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTttc < 1:2073525/71‑1 (MQ=255) cGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTa > 1:2990952/1‑38 (MQ=255) gTCACACGATAGCGCCCATTAAGTACGacggcagtaaatcc < 1:1240606‑M1/41‑15 (MQ=255) gTCACACGATAGCGCCCATTAAGTACGacggcagtaaatcc < 1:1559342‑M1/41‑15 (MQ=255) gTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTttctt < 1:2956691/71‑1 (MQ=255) gTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTttctt < 1:3177772/71‑1 (MQ=255) tCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTcgt > 1:876168‑M2/1‑43 (MQ=255) tCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTcgt > 1:3331270‑M2/1‑43 (MQ=255) tCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTttcttc < 1:141800/71‑1 (MQ=255) cacGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCg > 1:1039667/1‑54 (MQ=255) acGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCg < 1:3404304/71‑1 (MQ=255) cGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCgg < 1:2186348/71‑1 (MQ=255) gATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTttc > 1:1484465/1‑62 (MQ=255) aGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAg > 1:793846/1‑71 (MQ=255) ccATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGc < 1:3298721/71‑1 (MQ=255) ccATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGc < 1:489507/71‑1 (MQ=255) cATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGc > 1:1223240/1‑70 (MQ=255) aTTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGCaa < 1:1546827/71‑1 (MQ=255) ttAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGCaaa > 1:77330/1‑71 (MQ=255) aaGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGCa > 1:895719/1‑67 (MQ=255) tACGacggcagtaaatcccggcgtacttaatgggcgctatcgtgtgacgtttactaatggtaaccaca < 1:371448‑M1/68‑65 (MQ=255) acgacggcagtaaatcccggcgtacttaatgggcgctatcgtgtgacgtttactaatggtaaccacattac > 1:1124264‑M1/1‑3 (MQ=255) acgacggcagtaaatcccggcgtacttaatgggcgctatcgtgtga > 1:3331270‑M1/1‑3 (MQ=255) acgacggcagtaaatcccggcgtacttaatgggcgctatcgtgtga > 1:876168‑M1/1‑3 (MQ=255) cGCCGGGATTTACTGCCGTcgtacttaatgggcgctatcgtgtgacgtttactaatggtaacca < 1:1517164‑M2/64‑46 (MQ=255) cGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTttcttc > 1:3710967/1‑47 (MQ=255) gacggcagtaaatcccggcgtacttaatgggcgctatcgtgtgacgtttactaatggtaaccacattacgt < 1:1436039‑M1/71‑71 (MQ=255) | TCACCGTGGCTGACAAACGTAATGTGGTTACCATTAGTAAACGTCACACGATAGCGCCCATTAAGTACGCCGGGATTTACTGCCGTCGTACTCTTTTCCGCTGTGATTTTCTTCAGCGGATAGCGGGCAAACAGCTCCA > minE/1456436‑1456574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |