| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1476009 | 68 (1.310) | 6 (0.130) | 3/92 | NT | 8.5% | coding (1074/1131 nt) | nrdB | ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like |
| ? | minE | = 1476015 | 68 (1.450) | coding (1080/1131 nt) | nrdB | ribonucleoside diphosphate reductase 1, beta subunit, ferritin‑like | |||||
CCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1475935‑1476009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgCCCGACCAGATAAGAACTGACTTCCACTTCCTGCGGAGCAACCTGCACGTTATCAGACACCAGCCAAGT < minE/1476015‑1475947 CCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTA > 1:274416/1‑71 GTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATC < 1:1069124/71‑1 GTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATC < 1:2378667/71‑1 GATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTG < 1:527497/70‑1 GTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGCCCGACCAGATAAGA < 1:2536417/69‑1 TAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGCCCGACC > 1:1771032/1‑53 TAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGCCCGACC > 1:2909729/1‑53 TAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGCCCGACC > 1:2914399/1‑53 CGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGCCCGACCAGATAA > 1:1559504/1‑56 CGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGCCCGACCAGATAA > 1:2918929/1‑56 ATCTGCCCGACCAGATAAGAACTGACTTCCACTTCCTGCGGAGCAACCTGCACGTTATCAGACACCAGCC > 1:3212313/1‑70 ATCTGCCCGACCAGATAAGAACTGACTTCCACTTCCTGCGGAGCAACCTGCAC > 1:2381500/1‑53 TCTGCCCGACCAGATAAGAACTGACTTCCACTTCCTGCGGAGCAACCTGCACGTTATCAGACACCAGCC > 1:2681196/1‑69 CTGCCCGACCAGATAAGAACTGACTTCCACTTCCTGCGGAGCAACCTGCACGTTATCAGACACCAGCCAAG > 1:1759398/1‑71 TGCCCGACCAGATAAGAACTGACTTCCACTTCCTGCGGAGCAACCTGCACGTTATCAGACACCAGCCAAGT > 1:98132/1‑71 CCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1475935‑1476009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgCCCGACCAGATAAGAACTGACTTCCACTTCCTGCGGAGCAACCTGCACGTTATCAGACACCAGCCAAGT < minE/1476015‑1475947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |