New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 1545919 | 46 (0.890) | 6 (0.130) | 5/92 | NT | 12.2% | coding (268/285 nt) | yfcZ | conserved hypothetical protein |
? | minE | = 1545933 | 45 (0.960) | coding (254/285 nt) | yfcZ | conserved hypothetical protein |
GAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1545848‑1545919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgAAATGCTGATTTTCCAGCTGGGTCTGCGTTAATTCCTCTCGGGTACGTACGCCCCTGTCAGTTGCTG < minE/1545933‑1545867 GAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCT > 1:2625084/1‑71 ACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAG > 1:2051539/1‑60 ACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGAAATGCTGATTTTCCAGCTGGG > 1:1863889/1‑66 CGTACCCGAGAGGAATTAACGCAGACCCAGCTGAAATGCTGATTTTCCAGCTG < 1:3595344/53‑1 CGAGAGGAATTAACGCAGACCCAGCTGAAATGCTGATTTT < 1:912659/40‑1 AGAGGAATTAACGCAGACCCAGCTGAAATGCTGATTTTCC > 1:3773941/1‑40 AGGAATTAACGCAGACCCAGCTGAAATGCTGATTTTCC > 1:2654441/1‑38 AGGAATTAACGCAGACCCAGCTGAAATGCTGATTTTCC > 1:312424/1‑38 GCTGAAATGCTGATTTTCCAGCTGGGTCTGCGTTAATTCCTCTCGGGTACGTACGCCCCTG < 1:1065955/61‑1 GAAATGCTGATTTTCCAGCTGGGTCTGCGTTAATTCCTCTCGGGTACGTACGCCCCTGTCAGTTGCTG > 1:3723710/1‑68 GAAATGCTGATTTTCCAGCTGGGTCTGCGTTAATTCCTCTCGGG < 1:3264375/44‑1 GAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1545848‑1545919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgAAATGCTGATTTTCCAGCTGGGTCTGCGTTAATTCCTCTCGGGTACGTACGCCCCTGTCAGTTGCTG < minE/1545933‑1545867 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |