| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1545919 | 46 (0.890) | 6 (0.130) | 5/92 | NT | 12.2% | coding (268/285 nt) | yfcZ | conserved hypothetical protein |
| ? | minE | = 1545933 | 45 (0.960) | coding (254/285 nt) | yfcZ | conserved hypothetical protein | |||||
GAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTT > minE/1545853‑1545987 | gaaaaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaa < 1:1324810/71‑1 (MQ=255) aaaaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaaa > 1:6555/1‑71 (MQ=255) aaaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaa < 1:1814215/68‑1 (MQ=255) cGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAg > 1:922549/1‑71 (MQ=255) cccTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAt > 1:3482437/1‑71 (MQ=255) cTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAttt < 1:3852753/71‑1 (MQ=255) cTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAttt > 1:1976722/1‑71 (MQ=255) cTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAttt > 1:3667975/1‑71 (MQ=255) cTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAtt < 1:2155865/70‑1 (MQ=255) cTGCCAGCAACTGACAGGGGCGTACGTACACGAGAGGAATTAACGCAGACCCAGCTGGaa > 1:3036668/1‑60 (MQ=255) cAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTc > 1:3723710‑M2/1‑67 (MQ=255) cAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTc < 1:3246406/71‑1 (MQ=255) aaCTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg < 1:212925/71‑1 (MQ=255) aaCTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg < 1:3554646/71‑1 (MQ=255) cTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa < 1:1826163/71‑1 (MQ=255) aCAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGaaatgctgattttccagctggg > 1:1863889‑M1/1‑44 (MQ=255) aCAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaa < 1:3465007/48‑1 (MQ=255) aCAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAgg > 1:1583078/1‑70 (MQ=255) cAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTcagc < 1:1065955‑M2/61‑5 (MQ=255) aGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGCCa > 1:2203886/1‑70 (MQ=255) gggCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCGTCGCAGGCaa > 1:729708/1‑69 (MQ=255) gCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGt < 1:2788534/71‑1 (MQ=255) gCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGt < 1:2385007/71‑1 (MQ=255) tacgtacCCGAGAGGAATTAACGCAGACCCAGCTgg < 1:3912449/36‑1 (MQ=255) cgtacCCGAGAGGAATTAACGCAGCCCCAGCTGGaa > 1:2400531/1‑36 (MQ=255) cgtacCCGAGAGGAATTAACGCAGACCCAGCTGaaatgctgattttccagctg < 1:3595344‑M1/53‑21 (MQ=255) gtacCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATc < 1:3651186/71‑1 (MQ=255) cccGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTc < 1:3264375‑M2/44‑2 (MQ=255) cccGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGa < 1:3043552/64‑1 (MQ=255) ccGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAtt < 1:3259671/41‑1 (MQ=255) ccGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGata < 1:592788/71‑1 (MQ=255) cGAGAGGAATTAACGCAGACCCAGCTGaaatgctgatttt < 1:912659‑M1/40‑14 (MQ=255) agagaGGAATTAACGCAGACACAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGatat > 1:2145250/2‑71 (MQ=255) gagaGGAATTAACGCAGACCCAGCTGGAAAATCATCAttt > 1:1359336/1‑40 (MQ=255) gagaGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTc < 1:3894674/47‑1 (MQ=255) gagaGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATc > 1:2861338/1‑71 (MQ=255) agagGAATTAACGCAGACCCAGCTGaaatgctgattttcc > 1:3773941‑M1/1‑25 (MQ=255) agagGAATTAACGCAGACCCAGCTGGAAAATCAGCa > 1:2822452/1‑36 (MQ=255) agagGAATTAACGCAGACCCAGCTGGAAAATCAGCa > 1:665603/1‑36 (MQ=255) agagGAATTAACGCAGACCCAGCTGGAAAATCAGCa > 1:975061/1‑36 (MQ=255) agagGAATTAACGCAGACCCAGCTGGAAAATCAGCa > 1:3879932/1‑36 (MQ=255) agagGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc < 1:1984043/71‑1 (MQ=255) gagGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa > 1:3240453/1‑48 (MQ=255) agGAATTAACGCAGACCCAGCTGaaatgctgattttcc > 1:2654441‑M1/1‑23 (MQ=255) agGAATTAACGCAGACCCAGCTGaaatgctgattttcc > 1:312424‑M1/1‑23 (MQ=255) agGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAg < 1:2460339/71‑1 (MQ=255) ggAATTAACGCAGACCCAGCTGGAAAATCAGCAtt < 1:976004/35‑1 (MQ=255) gAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGgc < 1:1850633/71‑1 (MQ=255) aTTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGgcg > 1:1896387/1‑70 (MQ=255) ttAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGca > 1:1245779/1‑71 (MQ=255) tAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTg < 1:1368772/51‑1 (MQ=255) aaCGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc > 1:3530522/1‑62 (MQ=255) aaCGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc > 1:1403420/1‑62 (MQ=255) aaCGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc > 1:2268159/1‑62 (MQ=255) cGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCacac > 1:860403/1‑70 (MQ=255) gCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCg < 1:3770833/53‑1 (MQ=255) cAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGt < 1:1137192/71‑1 (MQ=255) aGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGt > 1:1094657/1‑70 (MQ=255) aGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGt > 1:3065225/1‑70 (MQ=255) gACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCa < 1:512986/71‑1 (MQ=255) gACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCa < 1:2303494/71‑1 (MQ=255) cccAGCTGGAAAATCAGCATTTcagctgggtctgcgttaattcctctcgggtacgtacgcccctgt > 1:1863889‑M2/1‑22 (MQ=255) ccAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGt < 1:2217267/66‑1 (MQ=255) cAGCTGGAAAATCAGCATTTcagctgggtctgcgttaattcctctcgggtacg < 1:3595344‑M2/53‑34 (MQ=255) aGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGActc > 1:3326534/1‑71 (MQ=255) gCTGaaatgctgattttccagctgggtctgcgttaattcctctcgggtacgtacgcccctg < 1:1065955‑M1/61‑58 (MQ=255) cTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGActct > 1:1657090/1‑70 (MQ=255) tGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGca < 1:3773665/55‑1 (MQ=255) ggAAAATCAGCATTTcagctgggtctgcgttaattcctct > 1:3773941‑M2/1‑15 (MQ=255) ggAAAATCAGCATTTcagctgggtctgcgttaattcct > 1:2654441‑M2/1‑15 (MQ=255) ggAAAATCAGCATTTcagctgggtctgcgttaattcct > 1:312424‑M2/1‑15 (MQ=255) ggAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGata > 1:1486607/1‑44 (MQ=255) ggAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCtt > 1:659746/1‑69 (MQ=255) ggAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCtt < 1:1872674/69‑1 (MQ=255) gaaatgctgattttccagctgggtctgcgttaattcctctcgggtacgtacgcccctgtcagttgctg > 1:3723710‑M1/1‑1 (MQ=255) gaaatgctgattttccagctgggtctgcgttaattcctctcggg < 1:3264375‑M1/44‑44 (MQ=255) | GAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTT > minE/1545853‑1545987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |