| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1583045 = | 35 (0.680) | 6 (0.130) | 3/88 | NT | 15.0% | coding (190/2016 nt) | ligA | DNA ligase, NAD(+)‑dependent |
| ? | minE | 1583066 = | 38 (0.850) | coding (169/2016 nt) | ligA | DNA ligase, NAD(+)‑dependent | |||||
TGCGCGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1583119‑1583045‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTATTC > minE/1583066‑1583135 TGCGCGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTG > 1:1859041/1‑69 GCGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAGGC < 1:1718442/71‑1 GCGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAGGC > 1:3119671/1‑71 CGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAGGCG < 1:113366/71‑1 GAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTA < 1:1403039/66‑1 AAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAG > 1:230835/1‑51 AAACCAAACATCCAGAACGGATTACGCCTGATTCGCCTACTCAACGTGTAG > 1:2819548/1‑51 AACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTA > 1:3594974/1‑49 AACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGT > 1:2149625/1‑48 GAACTGATTACGCCTGATTCGCCTACTCAACGTGT < 1:1652266/35‑1 GCCTACTCAACGTGTAGGCGAATCAGGCGTAATCAGTTCTGGA > 1:3030562/1‑43 CTACTCAACGTGTAGGCGAATCAGGCGTAATCAGTT > 1:3648018/1‑36 CTCAACGTGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTT < 1:3000488/48‑1 CTCAACGTGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTT < 1:50115/48‑1 CTCAACGTGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTT < 1:439806/48‑1 CAACGTGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTT < 1:3086107/46‑1 TAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCG < 1:640628/71‑1 AGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGC > 1:1939121/1‑56 AGGCAAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGC > 1:489702/1‑56 GGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTA > 1:1356600/1‑71 GGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTA > 1:547361/1‑71 GGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTA < 1:999074/71‑1 GGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCC > 1:1130745/1‑39 GGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCC > 1:116622/1‑39 GAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTATTC < 1:87916/71‑1 TGCGCGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1583119‑1583045‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTATTC > minE/1583066‑1583135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |