| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1583045 = | 35 (0.680) | 6 (0.130) | 3/88 | NT | 15.0% | coding (190/2016 nt) | ligA | DNA ligase, NAD(+)‑dependent |
| ? | minE | 1583066 = | 38 (0.850) | coding (169/2016 nt) | ligA | DNA ligase, NAD(+)‑dependent | |||||
ATTGGTACTTCATGGCGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTATTC > minE/1582999‑1583135 | aTTGGTACTTCATGGCGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATc < 1:260782/71‑1 (MQ=255) ttGGTACTTCATGGCGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAAt > 1:3738215/1‑69 (MQ=255) tGGTACTTCATGGCGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAg > 1:2600939/1‑71 (MQ=255) gTACTTCATGGCGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGc > 1:3306551/1‑71 (MQ=255) aTGGCGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATc < 1:2785718/70‑1 (MQ=255) cGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTc > 1:3330707/1‑71 (MQ=255) tATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGACGAATCAGGCGTAATCAGTTCTg > 1:2093094/1‑71 (MQ=255) aTCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTg > 1:1900672/1‑70 (MQ=255) tCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTgg < 1:570476/70‑1 (MQ=255) tCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTgg < 1:3800355/70‑1 (MQ=255) cTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGAt > 1:3686252/1‑71 (MQ=255) gCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGtt > 1:3414557/1‑71 (MQ=255) gCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGtt > 1:1760841/1‑71 (MQ=255) gAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGtt > 1:2812266/1‑68 (MQ=255) gAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTgg > 1:3442111/1‑71 (MQ=255) gAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTgg > 1:1675967/1‑71 (MQ=255) aaaGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAAt > 1:1107257/1‑43 (MQ=255) aaaGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGt > 1:1581569/1‑71 (MQ=255) aaGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGtt > 1:3040545/1‑71 (MQ=255) aaGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGtt < 1:2157022/71‑1 (MQ=255) aaGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGtt < 1:1075202/71‑1 (MQ=255) gccgccAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTc > 1:1897238/1‑71 (MQ=255) gccAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAg > 1:1942925/1‑71 (MQ=255) gccAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAg > 1:3415138/1‑71 (MQ=255) ccAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAg > 1:1313481/1‑70 (MQ=255) ccAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGc < 1:445003/71‑1 (MQ=255) cAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGtt < 1:255926/64‑1 (MQ=255) cAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGc < 1:2719205/70‑1 (MQ=255) aGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTcc > 1:3233606/1‑66 (MQ=255) cggcgCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTcgc > 1:2153427/1‑71 (MQ=255) ggcgCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTcgcg < 1:23576/71‑1 (MQ=255) ggcgCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTcgcg < 1:1456753/71‑1 (MQ=255) gcgcAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTcgcg > 1:398800/1‑70 (MQ=255) gcAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGttt < 1:2908469/58‑1 (MQ=255) aGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTcc > 1:217623/1‑58 (MQ=255) aGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTc > 1:3497653/1‑57 (MQ=255) aGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGtt > 1:3546804/1‑71 (MQ=255) CGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTcg < 1:113366‑M1/71‑1 (MQ=255) gcctactcaacgtgtaggcgAATCAGGCGTAATCAGTTCTGGa > 1:3030562‑M2/21‑43 (MQ=255) GCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTcgc < 1:1718442‑M1/71‑1 (MQ=255) GCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTcgc > 1:3119671‑M1/1‑71 (MQ=255) ctactcaacgtgtaggcgAATCAGGCGTAATCAGtt > 1:3648018‑M2/19‑36 (MQ=255) CTACACGTTGAGTAGGCGAATCAGGCGTAATCCGTTCTGGATGTTTGGttt > 1:2819548‑M1/1‑51 (MQ=255) CTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGttt > 1:230835‑M1/1‑51 (MQ=255) TACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGtt > 1:3594974‑M1/1‑49 (MQ=255) TACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTc < 1:1403039‑M1/66‑1 (MQ=255) ACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTc < 1:1652266‑M1/35‑1 (MQ=255) ACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGtt > 1:2149625‑M1/1‑48 (MQ=255) ctcaacgtgtaggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGttt < 1:50115‑M2/33‑1 (MQ=255) ctcaacgtgtaggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGttt < 1:3000488‑M2/33‑1 (MQ=255) ctcaacgtgtaggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGttt < 1:439806‑M2/33‑1 (MQ=255) CACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCa > 1:1859041‑M1/1‑69 (MQ=255) acGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCAt > 1:89266/1‑69 (MQ=255) acGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCAt > 1:1552386/1‑69 (MQ=255) acGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCa < 1:1900142/71‑1 (MQ=255) caacgtgtaggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGttt < 1:3086107‑M2/33‑1 (MQ=255) cGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCa < 1:3059181/70‑1 (MQ=255) gTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGc > 1:805609/1‑71 (MQ=255) ttGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTcgcg < 1:114860/54‑1 (MQ=255) ttGAGTAGGCGAATCAGGCGTAATCAGTGCTGGATGttt < 1:3188861/39‑1 (MQ=255) tGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCt > 1:1003728/1‑71 (MQ=255) gAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTcg > 1:893407/1‑59 (MQ=255) taggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCg < 1:640628‑M2/65‑1 (MQ=255) aggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTcgc > 1:1939121‑M2/6‑56 (MQ=255) aggcaAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTcgc > 1:489702‑M2/6‑56 (MQ=255) ggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTcc > 1:1130745‑M2/5‑39 (MQ=255) ggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTcc > 1:116622‑M2/5‑39 (MQ=255) ggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTa < 1:999074‑M2/67‑1 (MQ=255) ggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTa > 1:547361‑M2/5‑71 (MQ=255) ggcgAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTa > 1:1356600‑M2/5‑71 (MQ=255) gAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTATTc < 1:87916‑M2/70‑1 (MQ=255) | ATTGGTACTTCATGGCGTATCTGGCTGAAAGCCGCCAGCGGCGCAGCGCCTACACGTTGAGTAGGCGAATCAGGCGTAATCAGTTCTGGATGTTTGGTTTCCAGCTCGCGCAGTTCGCGCATCAGCCTGTCGTATTC > minE/1582999‑1583135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |