| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1675930 | 89 (1.720) | 6 (0.130) | 3/88 | NT | 7.5% | coding (1040/1155 nt) | yfgB | hypothetical protein |
| ? | minE | = 1675947 | 71 (1.590) | coding (1023/1155 nt) | yfgB | hypothetical protein | |||||
TTACGCAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1675855‑1675930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccacTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATCGAC < minE/1675947‑1675878 TTACGCAGGGTACGTTTCGTACGGTCGATAACCTCGCCCGCCAACTGACCACAGGCAGCATCGATATCAT > 1:944196/1‑70TTACGCAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCAT > 1:65293/1‑70TTACGCAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCAT > 1:2322359/1‑70TTACGCAGGGTACGTTTCGTACGGTCGATAACATCGCCCG‑CAACTGACCACAGGCAGCATCGATATCATCA > 1:3715566/1‑71TTACGAAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCAT > 1:805505/1‑70 TACGCAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCA > 1:3158218/1‑71 TACGCAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATC < 1:755274/70‑1 GCAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCAT < 1:1088721/66‑1 CAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCAC > 1:3391098/1‑71 CATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATC < 1:3739528/40‑1 CGCCAACTGACCACAGGCAGCATCGATATCATCACCACTATTGTGCGTAAAACTCGTGGTG < 1:2676664/61‑1 CGCCAACTGACCACAGGCAGCATCGATATCATCACCACTATTGTGCGTAAAACTCGTGGTG < 1:2264559/61‑1 CCAACTGACCACAGGCAGCATCGATATCATCACCACTATTGTGCGTAAAACTCGTGGTGAT > 1:2096430/1‑61 GACCACAGGCAGCATCGATATCATCACCACTATTGTGCGTAAAACTCGTGGTG < 1:1825565/53‑1 GACCACAGGCAGCATCGATATCATCACCACTATTGTGCGTAAAACTCGTGGTG < 1:2221899/53‑1 CCACAGGCAGCATCGATATCATCACCACTATTGTGCGTAAAACTCGTGGTGAT > 1:2006241/1‑53 TCACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGT < 1:1169228/70‑1 TCACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGT < 1:2511709/70‑1 CACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGCCAGTTGGCGGGCGATGTT < 1:1840358/70‑1 ACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTA < 1:1724086/70‑1 ACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTA < 1:866829/70‑1 ACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCG > 1:1980624/1‑60 ACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGAT < 1:857738/39‑1 CCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATC < 1:3364046/71‑1 CCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATC < 1:3914510/71‑1 CACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATCG < 1:2664202/71‑1 CACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATC > 1:3331151/1‑70 CACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATC > 1:3669115/1‑70 CACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATC > 1:2503952/1‑70 CACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATC > 1:1196964/1‑70 ACTATTGTCCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGG > 1:2999100/1‑58 ACTATTATGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCG > 1:3345077/1‑57 CTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATCGAC > 1:2243829/1‑71 TTACGCAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1675855‑1675930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccacTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATCGAC < minE/1675947‑1675878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |