| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1675930 | 89 (1.720) | 6 (0.130) | 3/88 | NT | 7.5% | coding (1040/1155 nt) | yfgB | hypothetical protein |
| ? | minE | = 1675947 | 71 (1.590) | coding (1023/1155 nt) | yfgB | hypothetical protein | |||||
Only 100 of 144 total aligned reads displayed.
CAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTCGATACGGCTG > minE/1675860‑1675998 | cAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCAC > 1:3391098‑M1/1‑71 (MQ=255) tACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGtt < 1:2024114/71‑1 (MQ=255) aCGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGttt > 1:2135862/1‑71 (MQ=255) gTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGtttt < 1:156277/70‑1 (MQ=255) tttCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGttt < 1:1055077/68‑1 (MQ=255) tCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACg > 1:2987785/1‑70 (MQ=255) tACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTAc > 1:3561800/1‑66 (MQ=255) aCGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTa > 1:3371900/1‑64 (MQ=255) gTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAg > 1:2243829‑M2/1‑70 (MQ=255) cGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGtttt > 1:1863859/1‑58 (MQ=255) cGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtg < 1:2664202‑M2/71‑4 (MQ=255) gATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtgg < 1:3914510‑M2/71‑5 (MQ=255) gATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtgg < 1:3364046‑M2/71‑5 (MQ=255) gATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtg > 1:3331151‑M2/1‑67 (MQ=255) gATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtg > 1:3669115‑M2/1‑67 (MQ=255) gATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtg > 1:2503952‑M2/1‑67 (MQ=255) gATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtg > 1:1196964‑M2/1‑67 (MQ=255) tAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGttt < 1:3155216/54‑1 (MQ=255) tAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtggt < 1:866829‑M2/70‑6 (MQ=255) aaCATCGCCCGCCAACTGGCCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtggtg < 1:1840358‑M2/70‑7 (MQ=255) aCATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtggtga < 1:2511709‑M2/70‑8 (MQ=255) aTCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAAc < 1:563493/71‑1 (MQ=255) tCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGaaa > 1:460696/1‑69 (MQ=255) tCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAAcc < 1:2446433/71‑1 (MQ=255) tCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAAcc < 1:761886/71‑1 (MQ=255) gcccgccAACTGACCACAGGCAGCATCGATATCATCACCACGAGttt < 1:3842177/47‑1 (MQ=255) cccgccAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGcaca > 1:1036413/1‑54 (MQ=255) cccgccAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTa < 1:3061835/71‑1 (MQ=255) ccgccAACTGACCACAGGCAGCATCGATATCATCACCACGAGtttt < 1:1019058/46‑1 (MQ=255) ccgccAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGGACAATAgt > 1:2999100‑M2/1‑56 (MQ=255) cgccAACTGACCACAGGCAGCATCGATATCATCACCACtattgtgcgtaaaactcgtggtg < 1:2264559‑M1/61‑24 (MQ=255) cgccAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCATAATAgt > 1:3345077‑M2/1‑55 (MQ=255) cgccAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAgtggt > 1:1980624‑M2/1‑55 (MQ=255) gccAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCt > 1:1074710/1‑71 (MQ=255) ccAACTGACCACAGGCAGCATCGATATCATCACCACtattgtgcgtaaaactcgtggtgat > 1:2096430‑M1/1‑36 (MQ=255) aaCTGACCAGAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCtcat > 1:1153683/1‑71 (MQ=255) aaCTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCtcat > 1:1653584/1‑71 (MQ=255) aaCTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCtcat < 1:3022966/71‑1 (MQ=255) aaCTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCtca > 1:2373699/1‑70 (MQ=255) aCTGACCACAGGCAGCATCGATATCATCACCACGAGt > 1:3379882/1‑37 (MQ=255) aCTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTa > 1:3717769/1‑41 (MQ=255) cTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCg < 1:1175325/61‑1 (MQ=255) cTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCtcat > 1:3784130/1‑69 (MQ=255) cTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCt < 1:1540569/66‑1 (MQ=255) tGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAAt > 1:915123/1‑47 (MQ=255) gACCACAGGCAGCATCGATATCATCACCACtattgtgcgtaaaactcgtggtg < 1:2221899‑M1/53‑24 (MQ=255) gACCACAGGCAGCATCGATATCATCACCACGAGTTTTa > 1:1428484/1‑38 (MQ=255) gACCACAGGCAGCATCGATATCATCACCACGAGTTTTa > 1:1604837/1‑38 (MQ=255) gACCACAGGCAGCATCGATATCATCACCACGAGTTTTa > 1:1759554/1‑38 (MQ=255) aCCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCt < 1:691337/63‑1 (MQ=255) aCCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCt < 1:2574313/63‑1 (MQ=255) aCCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAg < 1:3606873/69‑1 (MQ=255) cacaGGCAGCATCGATATCACCACCACGAGTTTTACGCACAAt < 1:3618928/43‑1 (MQ=255) acaGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATa > 1:963112/1‑43 (MQ=255) caGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATa > 1:3166367/1‑42 (MQ=255) caGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAg > 1:811665/1‑57 (MQ=255) ggCAGCATCGATATCATCACCACGAGTTTTACGCACaa < 1:203354/38‑1 (MQ=255) gcagcaTCGATATCATCACCACGAGTTTTACGCACaa < 1:1116801/37‑1 (MQ=255) gcagcaTCGATATCATCACCACGAGTTTTACGCACaa < 1:3169479/37‑1 (MQ=255) gcagcaTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTga < 1:919348/71‑1 (MQ=255) cagcaTCGATATCATCACCACGAGTTTTACGCACAATa > 1:2999094/1‑38 (MQ=255) cagcaTCGATATCATCACCACGAGTTTTACGCACAATa > 1:2779459/1‑38 (MQ=255) cagcaTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACtttt > 1:498185/1‑68 (MQ=255) agcaTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTgaga < 1:712085/71‑1 (MQ=255) agcaTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTgaga < 1:2102807/71‑1 (MQ=255) gcaTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTgaga > 1:2941960/1‑70 (MQ=255) caTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACttt < 1:1345217/64‑1 (MQ=255) caTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGaaa > 1:1712759/1‑71 (MQ=255) aTCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAAc > 1:1749080/1‑71 (MQ=255) cGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTa > 1:169930/1‑46 (MQ=255) gATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCtcatca > 1:1978278/1‑53 (MQ=255) gATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGt > 1:1829279/1‑71 (MQ=255) tatCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTc > 1:2855658/1‑70 (MQ=255) atcatcACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTCGa > 1:3551004/1‑71 (MQ=255) atcatcACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTCGa > 1:216079/1‑71 (MQ=255) atcaCCACGAGTTTTACGCACAATAgtggtgatgatatcgatgctgcctgtgg > 1:2006241‑M2/1‑25 (MQ=255) atcaCCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCtcatc > 1:305167/1‑46 (MQ=255) atcaCCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACg < 1:3375262/63‑1 (MQ=255) atcaCCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTCGATa > 1:552607/1‑70 (MQ=255) atcaCCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTCGATa < 1:2820810/70‑1 (MQ=255) tcaCCACtattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgt < 1:1169228‑M1/70‑64 (MQ=255) tcaCCACtattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgt < 1:2511709‑M1/70‑64 (MQ=255) tcaCCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACg < 1:2947610/62‑1 (MQ=255) tcaCCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACg < 1:3437317/62‑1 (MQ=255) caccacGAGTTTTACGCACAATAgtggtgatgatatcgatgctgcctgtggtcagttggcg < 1:2676664‑M2/61‑39 (MQ=255) caccacGAGTTTTACGCACAATAgtggtgatgatatcgatgctgcctgtggtc < 1:1825565‑M2/53‑31 (MQ=255) caccacGAGTTTTACGCACAATAgtggtgatgatatcgatgctgcctgtggtc < 1:2221899‑M2/53‑31 (MQ=255) accactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgtta < 1:1724086‑M1/70‑66 (MQ=255) accactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgtta < 1:866829‑M1/70‑66 (MQ=255) accactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcg > 1:1980624‑M1/1‑5 (MQ=255) accactattgtgcgtaaaactcgtggtgatgatatcgat < 1:857738‑M1/39‑35 (MQ=255) accacGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGaaa > 1:2710018/1‑58 (MQ=255) ccactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgttatc < 1:3914510‑M1/71‑68 (MQ=255) ccactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgttatc < 1:3364046‑M1/71‑68 (MQ=255) cactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgttatcg < 1:2664202‑M1/71‑69 (MQ=255) cactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgttatc > 1:3669115‑M1/1‑3 (MQ=255) cactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgttatc > 1:1196964‑M1/1‑3 (MQ=255) cactattgtgcgtaaaactcgtggtgatgatatcgatgctgcctgtggtcagttggcgggcgatgttatc > 1:3331151‑M1/1‑3 (MQ=255) acGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACgg > 1:943923/1‑58 (MQ=255) acGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTCGATAc > 1:2577828/1‑65 (MQ=255) | CAGGGTACGTTTCGTACGGTCGATAACATCGCCCGCCAACTGACCACAGGCAGCATCGATATCATCACCACGAGTTTTACGCACAATAGTGGTGAAACCGTAGCTCATCAGCACTTTTGAGAAACGGTCGATACGGCTG > minE/1675860‑1675998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |