New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 1869856 = | 43 (0.830) | 5 (0.110) | 4/90 | NT | 11.0% | intergenic (‑101/‑218) | ygcW/yqcE | predicted deoxygluconate dehydrogenase/predicted transporter |
? | minE | 1869880 = | 43 (0.940) | intergenic (‑125/‑194) | ygcW/yqcE | predicted deoxygluconate dehydrogenase/predicted transporter |
CTTTTTAAAATTATTTGACAATACGAATATCACACTGTGATTACGATCACATTAGCAGTTATGCCCTTATGCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1869930‑1869856 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctaaTGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCT > minE/1869880‑1869948 CTTTTTAAAATTATTTGACAATACGAATATCACACTGTGATTACGATCACATTAGCAGTTATGCCCTTATG > 1:1823715/1‑71 TCACATTAGCAGTTATGCCCTTATGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAAT > 1:3929838/1‑68 ATTAGCAGTTATGCCCTTATGCTAATGTGATCGTAATCACAGTGTGATATTC < 1:1242013/52‑1 TAGCAGTTATGCCCTTATGCTAATGTGATCGTAATCACAGTGTGATATTCGT > 1:1368452/1‑52 TAGCAGTTATGCCCTTATGCTAATGTGATCGTAATCACAGTGTGATATTCGT > 1:550232/1‑52 GCAGTTATGCCCTTATGCTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAA < 1:3369305/71‑1 CTAATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACT < 1:1314396/71‑1 AATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCT > 1:2119368/1‑71 ATGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCT < 1:1734713/70‑1 CTTTTTAAAATTATTTGACAATACGAATATCACACTGTGATTACGATCACATTAGCAGTTATGCCCTTATGCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1869930‑1869856 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctaaTGTGATCGTAATCACAGTGTGATATTCGTATTGTCAAATAATTTTAAAAAGCAGAAGCGTGATTACTCT > minE/1869880‑1869948 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |