| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2051691 | 56 (1.080) | 4 (0.090) | 3/90 | NT | 6.9% | intergenic (‑13/‑229) | ygiF/htrG | predicted adenylate cyclase/predicted signal transduction protein |
| ? | minE | = 2051703 | 59 (1.290) | intergenic (‑25/‑217) | ygiF/htrG | predicted adenylate cyclase/predicted signal transduction protein | |||||
CACGCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2051618‑2051691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttatGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTGCC < minE/2051703‑2051634 CACGCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACT > 1:568106/1‑71 CGCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTA < 1:2663604/71‑1 CGCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTT < 1:2965461/70‑1 GCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTAT < 1:201873/71‑1 GCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTAT < 1:2222767/71‑1 GCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTAT > 1:3342575/1‑71 GCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTA > 1:3338130/1‑70 GCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTT < 1:67558/69‑1 GGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTT < 1:2005524/56‑1 GGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTA > 1:904067/1‑53 TGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTT < 1:3198123/51‑1 TGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTCACTTATGTGACATAACCGATAAGTA < 1:305573/70‑1 ATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTATGTGACATAACCGATAAGTAA < 1:265351/69‑1 CGATTTCCTGAGCCATGGCCTTTACTTATGTGACATAACCGATAAGT < 1:671318/47‑1 CGATTTCCTGAGCCATGGCCTTTACTTATGTGACATAACCGATAAGT < 1:1886085/47‑1 ACTTATGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCA > 1:3095686/1‑69 CTTATGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAG > 1:2859277/1‑71 CTTATGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAA < 1:3498274/43‑1 TTATGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGA < 1:826314/40‑1 TATGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTG > 1:2755875/1‑71 TGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTGCC < 1:2104619/71‑1 TGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTG < 1:3480895/69‑1 CACGCAACGCCTCAACGGCACTGTGATTAACAATAAACTTTAATTCGATTTCCTGAGCCATGGCCTTTACTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2051618‑2051691‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttatGTGACATAACCGATAAGTAAAGGCCATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTGCC < minE/2051703‑2051634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |