| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2275478 = | NA (NA) | 4 (0.090) | 3/90 | NT | 100% | noncoding (251/1542 nt) | rrsB | 16S ribosomal RNA |
| ? | minE | 2362809 = | 0 (0.000) | noncoding (274/1542 nt) | rrsA | 16S ribosomal RNA | |||||
ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGtaggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2275547‑2275478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC > minE/2362809‑2362880 ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGT < 1:894910/71‑1 GTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAG > 1:3213221/1‑71 GTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAG > 1:1710308/1‑71 TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:812087/71‑1 TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG > 1:3221420/1‑71 TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:916607/71‑1 CGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT > 1:2660550/1‑71 CGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT > 1:564408/1‑71 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTG < 1:708227/71‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTG < 1:3227275/71‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:3381493/70‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:3223737/70‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTG < 1:2195321/71‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTA > 1:1189563/1‑67 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAGTAGCTAGTAGGTG > 1:2124280/1‑71 CAAGACCAAAGAGGGGGACCTTCGGGCCGCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:3249320/69‑1 CCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:2555541/63‑1 AAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT > 1:1620420/1‑61 CTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAACTAGTAGGT < 1:2645532/50‑1 TTCGGGCCTCTTGCCATCGGATGTGCCCAGATGTGATTAGCTAGTAGG < 1:2029362/48‑1 TTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:2537008/48‑1 TTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCAGCTA > 1:3044377/1‑67 TTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTT > 1:789486/1‑57 TCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG > 1:1139242/1‑47 TCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG > 1:827995/1‑47 GCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACCTACTA > 1:378007/1‑65 CCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:113386/42‑1 TCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTG < 1:3746964/42‑1 TCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT > 1:3313499/1‑41 TTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTG > 1:1625156/1‑40 CCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACC > 1:2826512/1‑39 TAGGTGAGCCGTTAGCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGC < 1:2480817/62‑1 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCTGATGGCAAGA > 1:1209188/1‑59 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA > 1:2073824/1‑71 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA > 1:2118712/1‑71 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG > 1:3561013/1‑68 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG < 1:3192843/68‑1 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG < 1:2521883/68‑1 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAG > 1:388312/1‑60 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACA < 1:1256886/46‑1 TAGGTGAGCCGTTACCCCACCTACTAGATAATCCCATCTGGGCACATCCGATGGCA < 1:3691907/56‑1 AGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC > 1:263460/1‑71 AGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA > 1:1181679/1‑70 AGGTGAGCCGTTACCCCACCTACTAGCTAATCCCAT < 1:2122188/36‑1 AGGTGAGCCGTTACCCCAACTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA > 1:1196528/1‑70 GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC < 1:507102/70‑1 GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAA > 1:381314/1‑65 GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCG < 1:156359/48‑1 GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGT < 1:2293635/67‑1 GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAG < 1:3056584/55‑1 GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATG < 1:3219700/50‑1 TGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAA < 1:3697798/53‑1 TGAGCCGTTACCCCACCTACTAGCTAATCCCATCT < 1:725202/35‑1 GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG > 1:2819638/1‑63 GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCC < 1:1616007/59‑1 GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAG > 1:453291/1‑53 GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAG > 1:2604919/1‑53 GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCA > 1:1832798/1‑51 ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGtaggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2275547‑2275478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC > minE/2362809‑2362880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |