New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE 2275478 =NA (NA)4 (0.090) 3/90 NT 100% noncoding (251/1542 nt) rrsB 16S ribosomal RNA
?minE 2362809 = 0 (0.000)noncoding (274/1542 nt) rrsA 16S ribosomal RNA

ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGtaggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/2275547‑2275478
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC  >  minE/2362809‑2362880
                                                                                                                                              
ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGT                                                                         <  1:894910/71‑1
  GTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAG                                                                       >  1:3213221/1‑71
  GTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAG                                                                       >  1:1710308/1‑71
   TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      <  1:812087/71‑1
   TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      >  1:3221420/1‑71
   TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      <  1:916607/71‑1
    CGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT                                                                     >  1:2660550/1‑71
    CGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT                                                                     >  1:564408/1‑71
     GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTG                                                                    <  1:708227/71‑1
     GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTG                                                                    <  1:3227275/71‑1
     GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT                                                                     <  1:3381493/70‑1
     GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT                                                                     <  1:3223737/70‑1
     GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTG                                                                    <  1:2195321/71‑1
     GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTA                                                                        >  1:1189563/1‑67
     GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAGTAGCTAGTAGGTG                                                                    >  1:2124280/1‑71
      CAAGACCAAAGAGGGGGACCTTCGGGCCGCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT                                                                     <  1:3249320/69‑1
           CCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      <  1:2555541/63‑1
              AAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT                                                                     >  1:1620420/1‑61
                         CTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAACTAGTAGGT                                                                     <  1:2645532/50‑1
                          TTCGGGCCTCTTGCCATCGGATGTGCCCAGATGTGATTAGCTAGTAGG                                                                      <  1:2029362/48‑1
                          TTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      <  1:2537008/48‑1
                          TTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCAGCTA                                                   >  1:3044377/1‑67
                          TTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTT                                                             >  1:789486/1‑57
                           TCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      >  1:1139242/1‑47
                           TCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      >  1:827995/1‑47
                               GCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACCTACTA                                                >  1:378007/1‑65
                                CCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG                                                                      <  1:113386/42‑1
                                  TCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTG                                                                    <  1:3746964/42‑1
                                  TCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT                                                                     >  1:3313499/1‑41
                                    TTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTG                                                                    >  1:1625156/1‑40
                                                    CCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACC                                                     >  1:2826512/1‑39
                                                                      TAGGTGAGCCGTTAGCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGC            <  1:2480817/62‑1
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCTGATGGCAAGA               >  1:1209188/1‑59
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA   >  1:2073824/1‑71
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA   >  1:2118712/1‑71
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG      >  1:3561013/1‑68
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG      <  1:3192843/68‑1
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG      <  1:2521883/68‑1
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAG              >  1:388312/1‑60
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACA                            <  1:1256886/46‑1
                                                                      TAGGTGAGCCGTTACCCCACCTACTAGATAATCCCATCTGGGCACATCCGATGGCA                  <  1:3691907/56‑1
                                                                       AGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC  >  1:263460/1‑71
                                                                       AGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA   >  1:1181679/1‑70
                                                                       AGGTGAGCCGTTACCCCACCTACTAGCTAATCCCAT                                     <  1:2122188/36‑1
                                                                       AGGTGAGCCGTTACCCCAACTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTA   >  1:1196528/1‑70
                                                                        GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC  <  1:507102/70‑1
                                                                        GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAA       >  1:381314/1‑65
                                                                        GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCG                        <  1:156359/48‑1
                                                                         GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGT    <  1:2293635/67‑1
                                                                         GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAG                <  1:3056584/55‑1
                                                                         GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATG                     <  1:3219700/50‑1
                                                                          TGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAA                 <  1:3697798/53‑1
                                                                          TGAGCCGTTACCCCACCTACTAGCTAATCCCATCT                                   <  1:725202/35‑1
                                                                           GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAG      >  1:2819638/1‑63
                                                                           GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCC          <  1:1616007/59‑1
                                                                           GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAG                >  1:453291/1‑53
                                                                           GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAG                >  1:2604919/1‑53
                                                                           GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCA                  >  1:1832798/1‑51
                                                                                                                                              
ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGtaggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  minE/2275547‑2275478
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTAC  >  minE/2362809‑2362880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.