New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | = 2277681 | 32 (0.620) | 3 (0.060) | 3/96 | NT | 7.6% | coding (1068/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter |
? | minE | = 2277705 | 43 (0.880) | coding (1044/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter |
GTCACTGCGTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2277609‑2277681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaTGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTT < minE/2277705‑2277637 GTCACTGCGTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTAT < 1:857120/71‑1 AGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTATGTTGAGGATGGATATGATC > 1:1139615/1‑70 GTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATT > 1:1088043/1‑47 TAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTA < 1:3307515/47‑1 AAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTAT < 1:1658823/43‑1 CGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGAGGATGGATATG > 1:3644473/1‑58 GACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTATGTTGAGGATGGATATGATCAACGTAATACCG > 1:2583221/1‑69 TTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCT < 1:3604971/41‑1 TATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTAT > 1:2452342/1‑42 ATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTT < 1:3494805/70‑1 ATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAA > 1:1587006/1‑59 ATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAA > 1:2326889/1‑59 GTCACTGCGTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2277609‑2277681 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttaTGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTT < minE/2277705‑2277637 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |