| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2277681 | 32 (0.620) | 3 (0.060) | 3/96 | NT | 7.6% | coding (1068/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter |
| ? | minE | = 2277705 | 43 (0.880) | coding (1044/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter | |||||
CGTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGACACCC > minE/2277616‑2277750 | cGTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGtt > 1:3362562/1‑70 (MQ=255)cGTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGt < 1:1488873/69‑1 (MQ=255) gTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGa < 1:1581115/71‑1 (MQ=255) ctgcGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCa < 1:925211/71‑1 (MQ=255) gcCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATatc < 1:1161164/71‑1 (MQ=255) aaaGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCt < 1:2312267/71‑1 (MQ=255) aaaGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCt > 1:2643139/1‑71 (MQ=255) aGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTAtgttgaggatggatatgatc > 1:1139615‑M1/1‑50 (MQ=255) tAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTA < 1:3307515‑M1/47‑1 (MQ=255) aaaaTCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATc > 1:2127294/1‑54 (MQ=255) aaaTCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCt < 1:1966955/64‑1 (MQ=255) aaaTCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACAt < 1:3494805‑M2/70‑2 (MQ=255) aaTCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGt > 1:3236175/1‑47 (MQ=255) cGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTAcgttgaggatggatatg > 1:3644473‑M1/1‑41 (MQ=255) gCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCt < 1:2291393/70‑1 (MQ=255) ccGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTc > 1:145725/1‑59 (MQ=255) gACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTAtgttgaggatggatatgatcaacgtaataccg > 1:2583221‑M1/1‑37 (MQ=255) gACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTAc > 1:2860696/1‑71 (MQ=255) aCTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTAcc < 1:1101231/71‑1 (MQ=255) aCTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTAcc < 1:567985/71‑1 (MQ=255) aCTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTAcc < 1:3724364/71‑1 (MQ=255) cTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCt < 1:2370049/54‑1 (MQ=255) ttgttgCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACAt > 1:2326889‑M2/1‑58 (MQ=255) ttgttgCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACAt > 1:1587006‑M2/1‑58 (MQ=255) ttgttgCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCg > 1:1073929/1‑71 (MQ=255) ttgttgCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCg > 1:2749504/1‑71 (MQ=255) gttgCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGc > 1:1393145/1‑71 (MQ=255) gttgCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGc > 1:1775985/1‑71 (MQ=255) ttgCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGcg < 1:3349533/71‑1 (MQ=255) cAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGcgtcg > 1:2303575/1‑71 (MQ=255) ccGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGt < 1:540206/71‑1 (MQ=255) ccGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGt < 1:2089113/71‑1 (MQ=255) cGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTc > 1:2574308/1‑71 (MQ=255) ggTAAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCt < 1:885382/71‑1 (MQ=255) atagatGCCGGTATTACGTTGATCATATCCATCCTc < 1:646447/36‑1 (MQ=255) atagatGCCGGTATTACGTTGATCATATCCATCCTCAACAta > 1:2452342‑M2/1‑40 (MQ=255) atagatGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCt < 1:2047220/71‑1 (MQ=255) atagatGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCt < 1:1506645/71‑1 (MQ=255) agatGCCGGTATTACGTTGATCATATCCATCCTCAACAtaa < 1:3604971‑M2/41‑4 (MQ=255) gCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGt > 1:2831971/1‑57 (MQ=255) cGGTATTACGTTGATCATATCCATCCTCAACAtaataccggcatctatctgaccgggctgcaacaagtc > 1:2583221‑M2/1‑32 (MQ=255) cGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGc < 1:1484129/47‑1 (MQ=255) ggTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGa > 1:1309860/1‑71 (MQ=255) ggTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGa > 1:3174434/1‑71 (MQ=255) gTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGac < 1:262358/71‑1 (MQ=255) tATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGac > 1:3237115/1‑70 (MQ=255) ttatgttgaggatggatatgatcaacgtaataccggcatct < 1:3604971‑M1/41‑39 (MQ=255) ttACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGac < 1:3739228/68‑1 (MQ=255) tatgttgaggatggatatgatcaacgtaataccggcatctat > 1:2452342‑M1/1‑2 (MQ=255) atgttgaggatggatatgatcaacgtaataccggcatctatctgaccgggctgcaacaagtcggcgattt < 1:3494805‑M1/70‑70 (MQ=255) atgttgaggatggatatgatcaacgtaataccggcatctatctgaccgggctgcaacaa > 1:1587006‑M1/1‑1 (MQ=255) atgttgaggatggatatgatcaacgtaataccggcatctatctgaccgggctgcaacaa > 1:2326889‑M1/1‑1 (MQ=255) aCGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGACAccc < 1:3304940/70‑1 (MQ=255) aCGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGACAccc < 1:2457243/70‑1 (MQ=255) | CGTGCTGCGCCTTCAAAGGTAAAATCGCCGACTTGTTGCAGCCCGGTCAGATAGATGCCGGTATTACGTTGATCATATCCATCCTCAACATAACCTGTACCCGGCGTCGTAGTCTGTTTCTGCCAGTCGACACCC > minE/2277616‑2277750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |