| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2377004 | 47 (0.910) | 5 (0.110) | 4/88 | NT | 10.7% | coding (1384/1641 nt) | ubiB | 2‑octaprenylphenol hydroxylase |
| ? | minE | = 2377016 | 43 (0.960) | coding (1372/1641 nt) | ubiB | 2‑octaprenylphenol hydroxylase | |||||
GGCAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2376930‑2377004‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttctggGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCACA < minE/2377016‑2376947 GGCAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTT < 1:2540761/71‑1 GCAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTC > 1:1330757/1‑71 GCAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTC < 1:3453769/71‑1 GCAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTC < 1:3021178/71‑1 CAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCT > 1:973038/1‑71 CAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCT > 1:968380/1‑71 CAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCT > 1:1858568/1‑71 AATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTG < 1:2348239/71‑1 ATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG < 1:1892478/71‑1 TCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG > 1:561087/1‑70 TCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG > 1:2768031/1‑70 ATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTT > 1:1027451/1‑62 TAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGGTCGAAAAAATGCCAGAAC < 1:1042734/70‑1 GCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGGTCGAAAAAATGCCAGAAC > 1:238960/1‑53 AAACTGTCGTAAACCAATTCAGGCAGTTCTGGGTCGAAAAAATGCC < 1:2927334/46‑1 AAACTGTCGTAAACCAATTCAGGCAGTTCTGGGTCGAAAAAATGCC < 1:2294397/46‑1 ACTGTCGTAAACCAATTCAGGCAGTTCTGGGTCGAAAAAATGCCAG > 1:1422714/1‑46 GTTCTGGGTCGTAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAA > 1:2114483/1‑63 TTCTGGGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTAT > 1:1691605/1‑66 TCTGGGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAG > 1:3198610/1‑71 TGGGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAG < 1:940293/69‑1 GGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCACA < 1:2337481/71‑1 GGCAATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2376930‑2377004‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttctggGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCACA < minE/2377016‑2376947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |