| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2377004 | 47 (0.910) | 5 (0.110) | 4/88 | NT | 10.7% | coding (1384/1641 nt) | ubiB | 2‑octaprenylphenol hydroxylase |
| ? | minE | = 2377016 | 43 (0.960) | coding (1372/1641 nt) | ubiB | 2‑octaprenylphenol hydroxylase | |||||
ATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGACCTGATCT > minE/2376934‑2377074 | aTCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG < 1:1892478‑M1/71‑1 (MQ=255) tCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG > 1:2768031‑M1/1‑70 (MQ=255) tCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGG > 1:561087‑M1/1‑70 (MQ=255) aTCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCa < 1:2784793/68‑1 (MQ=255) aTCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtt < 1:2448932/70‑1 (MQ=255) aTCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtt < 1:3155045/70‑1 (MQ=255) aTCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtt < 1:2023753/70‑1 (MQ=255) aTCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAt < 1:478366/69‑1 (MQ=255) aTCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAt < 1:2799503/69‑1 (MQ=255) tCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtt < 1:3503315/69‑1 (MQ=255) aaCACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAttttt < 1:446281/70‑1 (MQ=255) aaCACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAttttt < 1:3514553/70‑1 (MQ=255) acacTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAttttt < 1:3048246/69‑1 (MQ=255) acacTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTc < 1:729300/71‑1 (MQ=255) acacTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTc > 1:1606705/1‑71 (MQ=255) cacTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAttttt > 1:3713116/1‑68 (MQ=255) acTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtttttt < 1:1413678/68‑1 (MQ=255) acTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtttttt < 1:1496767/68‑1 (MQ=255) cTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtt < 1:2444536/63‑1 (MQ=255) tgtgCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACc < 1:2337481‑M2/71‑2 (MQ=255) cTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACccaga > 1:3198610‑M2/1‑66 (MQ=255) cTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACcca < 1:940293‑M2/69‑4 (MQ=255) tAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGgtcgaaaaaatgccagaac < 1:1042734‑M1/70‑20 (MQ=255) aaaTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtttt > 1:3796945/1‑56 (MQ=255) aaaTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAtt > 1:3324658/1‑54 (MQ=255) aaaTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACgg > 1:3571952/1‑71 (MQ=255) aaTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGgc < 1:1137888/71‑1 (MQ=255) aaTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGgc > 1:789824/1‑71 (MQ=255) aTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTc < 1:3564576/57‑1 (MQ=255) aTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACccagaa > 1:1691605‑M2/1‑60 (MQ=255) aTACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGgc > 1:2233225/1‑70 (MQ=255) ttGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTACGACccagaac > 1:2114483‑M2/1‑56 (MQ=255) gCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAttt < 1:2877324/47‑1 (MQ=255) gCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCtttt < 1:2409755/70‑1 (MQ=255) gCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCtttt < 1:3877708/70‑1 (MQ=255) cccTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCttttt < 1:3262184/70‑1 (MQ=255) ccTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACg > 1:1316780/1‑60 (MQ=255) ccTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACg > 1:3773141/1‑60 (MQ=255) ccTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACg > 1:2518596/1‑60 (MQ=255) cTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAttt < 1:2815642/44‑1 (MQ=255) cTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCtt < 1:986168/71‑1 (MQ=255) gcgcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCAttttt > 1:3814994/1‑43 (MQ=255) gcgcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCttt < 1:173218/69‑1 (MQ=255) gcgcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTaa < 1:1825029/71‑1 (MQ=255) gcgcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTaa < 1:1833384/71‑1 (MQ=255) gcgcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTa < 1:518252/70‑1 (MQ=255) gcgcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTa > 1:861450/1‑70 (MQ=255) cgcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTaaa > 1:3884258/1‑71 (MQ=255) gcAAACTGTCGTAAACCAATTCAGGCAGTTCTGGgtcgaaaaaatgccagaac > 1:238960‑M1/1‑34 (MQ=255) cAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATg < 1:2473297/71‑1 (MQ=255) aaaCTGTCGTAAACCAATTCAGGCAGTTCTGGgtcgaaaaaatgcc < 1:2294397‑M1/46‑15 (MQ=255) aaaCTGTCGTAAACCAATTCAGGCAGTTCTGGgtcgaaaaaatgcc < 1:2927334‑M1/46‑15 (MQ=255) aaaCTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGa > 1:1482926/1‑43 (MQ=255) aaaCTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAAt > 1:2341107/1‑69 (MQ=255) aCTGTCGTAAACCAATTCAGGCAGTTCTGGgtcgaaaaaatgccag > 1:1422714‑M1/1‑30 (MQ=255) cTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGctct < 1:1401133/71‑1 (MQ=255) tGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGgcg < 1:1270348/51‑1 (MQ=255) tCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTaaa > 1:968995/1‑62 (MQ=255) tCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCAc > 1:626712/1‑71 (MQ=255) gTAAACCAATTGAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCAc > 1:282012/1‑69 (MQ=255) gTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCAc > 1:2432570/1‑69 (MQ=255) gTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCAc > 1:2427911/1‑69 (MQ=255) aaaCCAATTCAGGCAGTTCTGGCATTTTTTAGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAgc > 1:3008802/1‑71 (MQ=255) aaCCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTa > 1:3597376/1‑55 (MQ=255) aCCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTc > 1:3380926/1‑50 (MQ=255) ccAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGctct > 1:3120901/1‑61 (MQ=255) aTTCAGGCAGTTCTGGCATTTTTTAGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAgg > 1:1275438/1‑70 (MQ=255) ttCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGaa < 1:922027/71‑1 (MQ=255) cAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGAAGGAAt < 1:512248/70‑1 (MQ=255) aGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGAc > 1:422493/1‑71 (MQ=255) gTTCTGGgtcgtaaaaatgccagaactgcctgaattggtttacgacagtttgcgccagggcaa > 1:2114483‑M1/1‑7 (MQ=255) gTTCTGGCATTTTTTCGACccagaactgcctgaattggtttacgacagtttgcgccagggcaagtattta < 1:1042734‑M2/70‑52 (MQ=255) gTTCTGGCATTTTTTCGACccagaactgcctgaattggtttacgacagtttgc > 1:238960‑M2/1‑19 (MQ=255) gTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGAcc < 1:1552136/71‑1 (MQ=255) ttCTGGgtcgaaaaaatgccagaactgcctgaattggtttacgacagtttgcgccagggcaagtat > 1:1691605‑M1/1‑6 (MQ=255) tCTGGgtcgaaaaaatgccagaactgcctgaattggtttacgacagtttgcgccagggcaagtatttacag > 1:3198610‑M1/1‑5 (MQ=255) tCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGACCt > 1:3783629/1‑70 (MQ=255) cTGGCATTTTTTCGACccagaactgcctgaattggtttacgacagt > 1:1422714‑M2/1‑16 (MQ=255) cTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGACCTGa > 1:1756954/1‑71 (MQ=255) tGGgtcgaaaaaatgccagaactgcctgaattggtttacgacagtttgcgccagggcaagtatttacag < 1:940293‑M1/69‑67 (MQ=255) tGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAg > 1:123286/1‑51 (MQ=255) tGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAg > 1:1091720/1‑51 (MQ=255) tGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGACCTg < 1:3743865/69‑1 (MQ=255) ggCATTTTTTCGACccagaactgcctgaattggtttacgacagttt < 1:2294397‑M2/46‑33 (MQ=255) ggCATTTTTTCGACccagaactgcctgaattggtttacgacagttt < 1:2927334‑M2/46‑33 (MQ=255) ggCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGACCTGATc > 1:3105714/1‑71 (MQ=255) ggtcgaaaaaatgccagaactgcctgaattggtttacgacagtttgcgccagggcaagtatttacagcaca < 1:2337481‑M1/71‑71 (MQ=255) gCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGACCTGAt < 1:3766012/69‑1 (MQ=255) | ATCTTATCAACACTGTGCTGTAAATACTTGCCCTGGCGCAAACTGTCGTAAACCAATTCAGGCAGTTCTGGCATTTTTTCGACCCAGAACGGCGCTTTTTCTTTAAATGCTCTCACCAGCGCAGGAATACCGACCTGATCT > minE/2376934‑2377074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |