New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | minE | 2409481 = | 65 (1.250) | 4 (0.080) | 3/96 | NT | 7.0% | coding (697/741 nt) | hemD | uroporphyrinogen III synthase |
? | minE | 2409516 = | 45 (0.920) | coding (732/741 nt) | hemD | uroporphyrinogen III synthase |
TCATTATGGCTTCCTGTTATGAGAGTTATTGTAATGCCCGTAAAAGCGCATCGTTGTCAGCGTTATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2409550‑2409481 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAG > minE/2409516‑2409583 TCATTATGGCTTCCTGTTATGAGAGTTATTGTAATGCCCGTAAAAGCGCATCGTTGTCAGCGTTATCGGC < 1:1399125/70‑1 TCATTATGGCTTCCTGTTATGAGAGTTATTGTAATGCCCGTAAAAGCGCATCGTTGTCAGCGTTATCGGC > 1:560452/1‑70 TTATGAGAGTTATTGTAATGCCCGTAAAAGCGCATCGTTGTCAGCGTTATCG < 1:1186978/52‑1 GCCCGTAAAAGCGCATCGTTGTCAGCGTTATCGGCATTACAATAACTCTCATAACAGGAAGCCATA < 1:2039692/66‑1 GCCCGTAAAAGCGCATCGTTGTCAGCGTTATCGGCATTACAATAACTCTCATAACAGGAAGCCATA < 1:2402334/66‑1 CCGTAAAAGCGCATCGTTGTCAGCGTTATCGGCATTACAATAACTCTCATAACAGGAAGCCATAA > 1:1376349/1‑65 TCGTTGTCAGCGTTATCGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAAC < 1:1853263/71‑1 GGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAG < 1:2386789/71‑1 GGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAG < 1:2777890/71‑1 CATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAA < 1:195702/68‑1 TCATTATGGCTTCCTGTTATGAGAGTTATTGTAATGCCCGTAAAAGCGCATCGTTGTCAGCGTTATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2409550‑2409481 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAG > minE/2409516‑2409583 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |