| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2409481 = | 65 (1.250) | 4 (0.080) | 3/96 | NT | 7.0% | coding (697/741 nt) | hemD | uroporphyrinogen III synthase |
| ? | minE | 2409516 = | 45 (0.920) | coding (732/741 nt) | hemD | uroporphyrinogen III synthase | |||||
GCCCGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAG > minE/2409448‑2409583 | gCCCGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCAt < 1:503982/70‑1 (MQ=255) cccGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTa > 1:412278/1‑71 (MQ=255) cGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTAc > 1:1390908/1‑70 (MQ=255) cGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACa < 1:793139/71‑1 (MQ=255) ggAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACATCGATGCGCTTTTACGGGCATTACAAt < 1:1255615/71‑1 (MQ=255) cTGGGCTGGCAAGACATTAAGGTCGCCTATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAAct > 1:3784163/1‑71 (MQ=255) cTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAAct < 1:204909/71‑1 (MQ=255) tGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAAct > 1:3660032/1‑70 (MQ=255) ggCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAActct > 1:3490992/1‑70 (MQ=255) ggCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACtctc < 1:3585698/71‑1 (MQ=255) gCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATaa > 1:2069143/1‑70 (MQ=255) gCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAAc < 1:105873/71‑1 (MQ=255) aGACATTAAGGTCGCCGATAACGCTGACAACGATGCTCTTTTACGGTCATTACAATAACTCTCATAACAg > 1:308206/1‑70 (MQ=255) gACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAgg > 1:2405010/1‑70 (MQ=255) gACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAgg > 1:910550/1‑70 (MQ=255) gACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGa < 1:3048215/71‑1 (MQ=255) gACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGa < 1:2770174/71‑1 (MQ=255) ttAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACa < 1:3252255/49‑1 (MQ=255) ttAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGc > 1:3845328/1‑70 (MQ=255) tAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATaa > 1:2886618/1‑61 (MQ=255) tAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATaa < 1:690350/61‑1 (MQ=255) tAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGcc > 1:2425113/1‑70 (MQ=255) aaGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAAt > 1:1846145/1‑49 (MQ=255) aGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCAt < 1:2711418/70‑1 (MQ=255) aGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATa < 1:1286980/71‑1 (MQ=255) ggTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACa < 1:850051/60‑1 (MQ=255) gTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGa < 1:3280231/62‑1 (MQ=255) tCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATg < 1:1002225/71‑1 (MQ=255) cGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATa > 1:2312090/1‑45 (MQ=255) gcccgtaaaagcgcatcgttgtcagcgttatcggcATTACAATAACTCTCATAACAGGAAGCCATa < 1:2402334‑M2/31‑1 (MQ=255) gcccgtaaaagcgcatcgttgtcagcgttatcggcATTACAATAACTCTCATAACAGGAAGCCATa < 1:2039692‑M2/31‑1 (MQ=255) GCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGa > 1:560452‑M1/1‑70 (MQ=255) GCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGa < 1:1399125‑M1/70‑1 (MQ=255) ccgtaaaagcgcatcgttgtcagcgttatcggcATTACAATAACTCTCATAACAGGAAGCCATaa > 1:1376349‑M2/34‑65 (MQ=255) CGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATaa < 1:1186978‑M1/52‑1 (MQ=255) aTAACGCTGACAACGATGCGCTTTTACGGGCATTAc < 1:2581076/36‑1 (MQ=255) tAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGaa > 1:3899336/1‑70 (MQ=255) aaCGCTGACAACGATGCGCTTTTACGGGCATTACaa > 1:2494102/1‑36 (MQ=255) aaCGCTGACAACGATGCGCTTTTACGGGCATTACaa > 1:1717705/1‑36 (MQ=255) cGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAg < 1:2600649/71‑1 (MQ=255) gCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAg < 1:612493/48‑1 (MQ=255) gCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACaa > 1:269064/1‑69 (MQ=255) gCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAg > 1:3245737/1‑70 (MQ=255) gCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGa < 1:2003155/71‑1 (MQ=255) cTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGaa > 1:2216079/1‑65 (MQ=255) tGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATaa > 1:977246/1‑56 (MQ=255) aCAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACaa < 1:995732/65‑1 (MQ=255) cAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGaaaaaa < 1:389425/71‑1 (MQ=255) tcgttgtcagcgttatcggcATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAAc < 1:1853263‑M2/51‑1 (MQ=255) aaCGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGaa > 1:769483/1‑60 (MQ=255) cGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCt > 1:1145517/1‑71 (MQ=255) gATGCGCTTTTACGGGCATTACAATAACTCTCATaa > 1:2753748/1‑36 (MQ=255) gATGCGCTTTTACGGGCATTACAATAACTCTCATAACa > 1:514314/1‑38 (MQ=255) aTGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTcc > 1:1952951/1‑71 (MQ=255) cgcTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTccgcc < 1:2201595/71‑1 (MQ=255) ttttACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTg > 1:267134/1‑71 (MQ=255) ttACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAAcc > 1:2663694/1‑60 (MQ=255) aCGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGaaa < 1:3287759/53‑1 (MQ=255) cGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTg < 1:67487/70‑1 (MQ=255) gggCATTACAATAACTCTCATAACAGGAAGCCATAAt > 1:1705291/1‑37 (MQ=255) ggcATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAag < 1:2386789‑M2/68‑1 (MQ=255) ggcATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAag < 1:2777890‑M2/68‑1 (MQ=255) cATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGaa < 1:195702‑M2/67‑1 (MQ=255) | GCCCGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAACTCTCATAACAGGAAGCCATAATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAG > minE/2409448‑2409583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |