New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	= 2633288	47 (0.910)	8 (0.170)	3/92	NT	15.6%	coding (306/768 nt)	livG	leucine/isoleucine/valine transporter subunit
	?	minE	= 2633300	44 (0.940)					coding (318/768 nt)	livG	leucine/isoleucine/valine transporter subunit

CGCATGGGCGTGGTGCGCACCTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/2633217‑2633288 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgATGCTGCGCCACCAGCAGGTTTTCAATTACCGTCATTTCACGGAACAGACGCACATGCTGGAAGGT  <  minE/2633300‑2633235                                                                                                                                            CGCATGGGCGTGGTGCGCACCTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCT                                                                     >  1:2348081/1‑71  GCATGGGCGTGGTGCGCACCTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTG                                                                    >  1:3692570/1‑71  GCATGGGCGTGGTGCGCACCTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTG                                                                    >  1:3819113/1‑71                     CTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCGACCAGCAGG                                                 >  1:1754162/1‑71                     CTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCCACCAGCAGG                                                 >  1:2915875/1‑71                     CTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCCACCAGCAGG                                                 >  1:3141057/1‑71                     CTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCAACCAGCAGG                                                 >  1:1758699/1‑71                         CAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCCACCA                                                      <  1:1091010/62‑1                               GTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCT                                                                     <  1:1041664/41‑1                                          CCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCCAC                                                        >  1:3674782/1‑43                                          CCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCCAC                                                        >  1:3679140/1‑43                                          CCGTGAAATGACGGTAATTGAAAACCTGCTGATGCTGCGCCAC                                                        >  1:376089/1‑43                                                                    TGCTGATGCTGCGCCACCAGCAGGTTTTCAATTACCGTCATTTCACGGAACAGACGCACATGCTGGAAGGT  >  1:3758355/1‑71                                                                     GCTGATGCTGCGCCACCAGCAGGTTTTCAATTACCGTCATTTCACGGAACAGACGCACATGCTGGAAGGT  <  1:3427720/70‑1                                                                        GATGCTGCGCCACCAGCAGGTTTTCAATTACCGTCATTTCACGGAACAGACG                 >  1:1020321/1‑52                                                                                                                                            CGCATGGGCGTGGTGCGCACCTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/2633217‑2633288 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgATGCTGCGCCACCAGCAGGTTTTCAATTACCGTCATTTCACGGAACAGACGCACATGCTGGAAGGT  <  minE/2633300‑2633235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.