| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2736896 | 51 (0.980) | 5 (0.110) | 3/86 | NT | 9.6% | coding (2040/2115 nt) | fusA | protein chain elongation factor EF‑G |
| ? | minE | = 2736913 | 51 (1.170) | coding (2057/2115 nt) | fusA | protein chain elongation factor EF‑G | |||||
ACGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2736820‑2736896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcatacTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTATCCGAAC < minE/2736913‑2736845 ACGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCA > 1:3204841/1‑71 CGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCAT > 1:648728/1‑71 CGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGT‑‑TCTGACCAAAGGTCGTGCATCA > 1:2082186/1‑71 GCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCAT > 1:478077/1‑70 CTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCA < 1:3253531/71‑1 AAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATA < 1:1552877/70‑1 AAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATA > 1:3195503/1‑70 TCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATC < 1:292961/56‑1 TCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATC < 1:734733/56‑1 GGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACTTCAGGAATTCCATAGTGTATG < 1:2395285/70‑1 CTGACCAAAGGTCGTGCATCATACTTCAGGAATTCCATAGTGTAT < 1:3034097/45‑1 CTGACCAAAGGTCGTGCATCATACTTCAGGAATTCCATAGTGTAT < 1:582087/45‑1 GACCAAAGGTCGTGCATCATACTTCAGGAATTCCATAGTGTATGA > 1:2392673/1‑45 GACCAAAGGTCGTGCATCATACTTCAGGAATTCCATAGTGTATGA > 1:130637/1‑45 ATCATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTAc < 1:1622800/70‑2 TCATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTAT < 1:1373167/69‑1 TCATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGA < 1:894079/60‑1 TCATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAAC > 1:968041/1‑52 TCATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAAC < 1:1135967/52‑1 CATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGA > 1:3458992/1‑47 ATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTATCCG < 1:596819/70‑1 ATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTATCCG > 1:1752215/1‑70 ATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTATCCG < 1:1171602/70‑1 ATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAG < 1:566659/47‑1 ATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAG < 1:3326954/47‑1 ATACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCA < 1:3933855/44‑1 TACTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTATCCGAA > 1:269345/1‑71 CTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTATCCGAAC < 1:3224046/70‑1 ACGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/2736820‑2736896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcatacTTCAGGAATTCCATAGTGTATGATGCACGACCTTTGGTCAGAGAACGCAGCTGAGTTGCGTATCCGAAC < minE/2736913‑2736845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |