| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2736896 | 51 (0.980) | 5 (0.110) | 3/86 | NT | 9.6% | coding (2040/2115 nt) | fusA | protein chain elongation factor EF‑G |
| ? | minE | = 2736913 | 51 (1.170) | coding (2057/2115 nt) | fusA | protein chain elongation factor EF‑G | |||||
Only 100 of 103 total aligned reads displayed.
AGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCGTGGT > minE/2736827‑2736965 | aGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATaca > 1:3296827/1‑71 (MQ=255) tACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATaca > 1:2029324/1‑69 (MQ=255) ccGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTa < 1:3006929/70‑1 (MQ=255) ccGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTAt > 1:1315344/1‑71 (MQ=255) gCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATgg < 1:3763434/71‑1 (MQ=255) tCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTa < 1:1401543/64‑1 (MQ=255) tGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTcc > 1:1804308/1‑71 (MQ=255) aaTGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTg > 1:1952955/1‑70 (MQ=255) aaTGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTg < 1:1082443/70‑1 (MQ=255) aaTGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTg > 1:3632312/1‑70 (MQ=255) gTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTa < 1:37160/56‑1 (MQ=255) gTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAg < 1:3224046‑M2/70‑2 (MQ=255) ttCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgta > 1:269345‑M2/1‑68 (MQ=255) cGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtat < 1:596819‑M2/70‑5 (MQ=255) cGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtat > 1:1752215‑M2/1‑66 (MQ=255) cGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtat < 1:1171602‑M2/70‑5 (MQ=255) ggATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACttcaggaattccatagtgtatg < 1:2395285‑M1/70‑23 (MQ=255) gtaCGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtatgat < 1:1622800‑M2/69‑8 (MQ=255) aTACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtatga < 1:1373167‑M2/69‑7 (MQ=255) cGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAg < 1:85488/71‑1 (MQ=255) cAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTa < 1:2608641/45‑1 (MQ=255) aaCTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAgcgc > 1:3088324/1‑71 (MQ=255) cTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCt < 1:760834/52‑1 (MQ=255) cTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAgc < 1:244419/67‑1 (MQ=255) cTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGcc > 1:3531840/1‑70 (MQ=255) cTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCg < 1:857933/71‑1 (MQ=255) tCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGaa > 1:2199089/1‑54 (MQ=255) tCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtatga < 1:894079‑M2/60‑7 (MQ=255) tCAGCAGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGCAATTCCTGAAGTATGATGAAg > 1:128479/1‑65 (MQ=255) cAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAg < 1:78759/64‑1 (MQ=255) cAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAg > 1:2688140/1‑71 (MQ=255) gCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAgcg > 1:397593/1‑64 (MQ=255) gCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTa < 1:3855841/71‑1 (MQ=255) gTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtatga > 1:968041‑M2/1‑46 (MQ=255) gTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtatga < 1:1135967‑M2/52‑7 (MQ=255) gTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGtt > 1:485038/1‑71 (MQ=255) tctcTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGc > 1:1286134/1‑71 (MQ=255) ctctGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtat < 1:3326954‑M2/47‑5 (MQ=255) ctctGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtat < 1:566659‑M2/47‑5 (MQ=255) ctctGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGtt > 1:136943/1‑68 (MQ=255) ctctGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGtt > 1:1717213/1‑68 (MQ=255) ctctGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGtt > 1:2712300/1‑68 (MQ=255) tctGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtatg > 1:3458992‑M2/1‑42 (MQ=255) tctGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCt > 1:1487567/1‑70 (MQ=255) ctGACCAAAGGTCGTGCATCATACttcaggaattccatagtgtat < 1:3034097‑M1/45‑22 (MQ=255) ctGACCAAAGGTCGTGCATCATACttcaggaattccatagtgtat < 1:582087‑M1/45‑22 (MQ=255) tGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAgtat < 1:3933855‑M2/44‑5 (MQ=255) tGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCt < 1:2561479/68‑1 (MQ=255) tGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCt < 1:2696425/68‑1 (MQ=255) tGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTc > 1:1330682/1‑69 (MQ=255) gACCAAAGGTCGTGCATCATACttcaggaattccatagtgtatga > 1:2392673‑M1/1‑22 (MQ=255) gACCAAAGGTCGTGCATCATACttcaggaattccatagtgtatga > 1:130637‑M1/1‑22 (MQ=255) aCCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCa < 1:3273932/68‑1 (MQ=255) aCCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAg < 1:3658675/69‑1 (MQ=255) aCCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGc > 1:1091046/1‑71 (MQ=255) aCCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGc < 1:721852/71‑1 (MQ=255) ccAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGcc > 1:2379529/1‑71 (MQ=255) cAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCa < 1:1340133/66‑1 (MQ=255) aaaGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCg > 1:3389331/1‑70 (MQ=255) aaaGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGt < 1:379264/71‑1 (MQ=255) aaGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTa < 1:3051017/71‑1 (MQ=255) aaGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTa < 1:1099449/71‑1 (MQ=255) aaGGTCGTCCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGt > 1:669944/1‑70 (MQ=255) aGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTaa > 1:1116223/1‑71 (MQ=255) ggTCGTGCATCATACACTATGGAATTACTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCa > 1:2013121/1‑62 (MQ=255) tCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTg < 1:1380040/71‑1 (MQ=255) tCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTg < 1:1385179/71‑1 (MQ=255) catcatACACTATGGAATTCCTGAAGTATGATGAAGCGCCGa > 1:1539308/1‑42 (MQ=255) catcatACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGcc > 1:2141385/1‑71 (MQ=255) atcatACttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtac < 1:1622800‑M1/70‑64 (MQ=255) atcatACACTATGGAATTCCTGAAGTATGATGAAGCGC‑‑AGTAACGTTGCTCAg > 1:3201780/1‑53 (MQ=255) tcatACttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtat < 1:1373167‑M1/69‑64 (MQ=255) tcatACttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctga < 1:894079‑M1/60‑55 (MQ=255) tcatACttcaggaattccatagtgtatgatgcacgacctttggtcagagaac < 1:1135967‑M1/52‑47 (MQ=255) tcatACttcaggaattccatagtgtatgatgcacgacctttggtcagagaac > 1:968041‑M1/1‑6 (MQ=255) tcatACACTATGGAATTCCTGAAgtatgatgcacgacctttggtc > 1:2392673‑M2/1‑23 (MQ=255) tcatACACTATGGAATTCCTGAAgtatgatgcacgacctttggtc > 1:130637‑M2/1‑23 (MQ=255) tcatACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCg < 1:3834252/71‑1 (MQ=255) tcatACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCg < 1:1306848/71‑1 (MQ=255) tcatACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCg < 1:3496022/71‑1 (MQ=255) tcatACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCg < 1:771491/71‑1 (MQ=255) catACttcaggaattccatagtgtatgatgcacgacctttggtcaga > 1:3458992‑M1/1‑5 (MQ=255) catACACTATGGAATTCCTGAAgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtatcc < 1:2395285‑M2/70‑49 (MQ=255) atACttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtatccg < 1:1171602‑M1/70‑67 (MQ=255) atACttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtatccg > 1:1752215‑M1/1‑4 (MQ=255) atACttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtatccg < 1:596819‑M1/70‑67 (MQ=255) atACttcaggaattccatagtgtatgatgcacgacctttggtcagag < 1:3326954‑M1/47‑44 (MQ=255) atACttcaggaattccatagtgtatgatgcacgacctttggtcagag < 1:566659‑M1/47‑44 (MQ=255) atACttcaggaattccatagtgtatgatgcacgacctttggtca < 1:3933855‑M1/44‑41 (MQ=255) atACACTATGGAATTCCTGAAgtatgatgcacgacctttggtcag < 1:582087‑M2/45‑25 (MQ=255) atACACTATGGAATTCCTGAAgtatgatgcacgacctttggtcag < 1:3034097‑M2/45‑25 (MQ=255) atACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAAc > 1:3894780/1‑43 (MQ=255) atACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGt < 1:3088176/45‑1 (MQ=255) atACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCGt < 1:2945016/70‑1 (MQ=255) tACttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtatccgaa > 1:269345‑M1/1‑3 (MQ=255) acacTATGGAATTCCTGAAGTATGATGAAGCGCCGAg > 1:3296100/1‑37 (MQ=255) acacTATGGAATTCCTGAAGTATGATGAAGCGCCGAGt > 1:41608/1‑38 (MQ=255) acacTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCg < 1:1733753/67‑1 (MQ=255) acacTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCGTgg > 1:3772988/1‑70 (MQ=255) cttcaggaattccatagtgtatgatgcacgacctttggtcagagaacgcagctgagttgcgtatccgaac < 1:3224046‑M1/70‑70 (MQ=255) | AGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCGTGGT > minE/2736827‑2736965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |