| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2903481 = | 76 (1.470) | 6 (0.130) | 3/94 | NT | 7.8% | coding (564/2139 nt) | nrdD | anaerobic ribonucleoside‑triphosphate reductase |
| ? | minE | 2903505 = | 72 (1.510) | coding (540/2139 nt) | nrdD | anaerobic ribonucleoside‑triphosphate reductase | |||||
GATTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2903552‑2903481‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAATATCG > minE/2903505‑2903574 GATTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGC < 1:1439693/69‑1 ATTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTT < 1:3233520/71‑1 TTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTT > 1:1279775/1‑70 TTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTT > 1:3585004/1‑70 CGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGC < 1:743777/50‑1 CTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTT < 1:3687301/43‑1 CCTGAAAGGCATGCTGACCCAGGGCTTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACG < 1:3020774/66‑1 AAAGGCATGCTGACCCAGGGCTTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGT < 1:3255713/68‑1 AGGCATGCTGACCCAGGGCTTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAA > 1:2722664/1‑68 AGGCATGCTGACCCAGGGCTTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAA > 1:2131695/1‑68 AGGCATGCTGACCCAGGGCTTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAA > 1:436348/1‑68 AGGCATGCTGACCCAGGGCTTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAA > 1:178018/1‑68 CTTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAAT > 1:909639/1‑70 CTTTCAGGTCGATCAACATGCAGTTGAACATCGGG > 1:2308607/1‑35 TTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACG < 1:830030/41‑1 TTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACG < 1:2920352/41‑1 TTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAAC < 1:3727921/40‑1 TTTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAAC < 1:1325387/40‑1 TTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAATATC > 1:642433/1‑71 TTCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAATATC > 1:2150786/1‑71 TCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAATATCG > 1:3048062/1‑71 TCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAATA < 1:2941798/68‑1 TCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAATA < 1:1372686/68‑1 TCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGAT > 1:3480295/1‑60 GATTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2903552‑2903481‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttCAGGTCGATCAACATGCAGTTGAACATCGGGAAGAACGGTGAGTAATCGAGATCGTGATAGTGAATATCG > minE/2903505‑2903574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |