| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2918569 = | 51 (0.980) | 3 (0.070) | 3/90 | NT | 7.1% | coding (1749/1815 nt) | yjgL | hypothetical protein |
| ? | minE | 2918613 = | 34 (0.740) | coding (1793/1815 nt) | yjgL | hypothetical protein | |||||
ACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2918643‑2918569‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggaAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTA > minE/2918613‑2918678 ACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGG < 1:1828968/71‑1ACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGG < 1:335591/71‑1 ATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTACATTTTCCGGTG < 1:1470173/71‑1 ATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTG < 1:1670641/71‑1 TATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGT > 1:1803966/1‑68 AGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTG > 1:1671035/1‑59 CTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCG > 1:3301932/1‑41 CCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGAAGAATAGACCTATCACTGCATAAAATAA > 1:2504491/1‑71 CACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGAAGAATAGACCTATCACTGCATAAAATAA < 1:2705682/70‑1 CCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGAAGAATAGACCTATCACTGCATAAAATAATG > 1:3752509/1‑70 GGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTT > 1:2597464/1‑53 GTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTA < 1:623779/71‑1 TGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGC < 1:2246121/40‑1 GAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTT > 1:2437219/1‑48 ACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2918643‑2918569‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggaAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTA > minE/2918613‑2918678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |