| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 134415 = | 41 (0.790) | 4 (0.100) | 3/76 | NT | 13.7% | intergenic (‑74/+40) | panB/yadC | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase/predicted fimbrial‑like adhesin protein |
| ? | minE | 134452 = | 20 (0.520) | intergenic (‑111/+3) | panB/yadC | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase/predicted fimbrial‑like adhesin protein | |||||
TATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTACCTGGAAAGTACTGGT > minE/134346‑134484 | tATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCg > 1:1612514/1‑71 (MQ=255) ccTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTag > 1:1154591/1‑71 (MQ=255) aatattgctatcgaacccggcgaatttaaagccaccagtactttccaggtaacctatccctgataaCg < 1:3501643‑M1/2‑1 (MQ=255) ttgctatcgaacccggcgaatttaaagccaccagtactttccaggtaacctatccctgataaCGTagcag > 1:2006903‑M1/63‑70 (MQ=255) aTAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTagcag < 1:3013994/70‑1 (MQ=255) aTAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTagcag > 1:3870249/1‑70 (MQ=255) gctatcgaacccggcgaatttaaagccaccagtactttccaggtaacctatccctgataaCGTAgcagca > 1:682337‑M1/61‑70 (MQ=255) aaaTTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCAc > 1:1273592/1‑71 (MQ=255) ctatcgaacccggcgaatttaaagccaccagtactttccaggtaacctatccctgataaCGTAGCAGCACt < 1:2196276‑M1/12‑1 (MQ=255) tatcgaacccggcgaatttaaagccaccagtactttccaggtaacctatccctgataaCg > 1:2053394‑M1/59‑60 (MQ=255) ttGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGc > 1:1515071/1‑71 (MQ=255) tGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGc > 1:3627291/1‑70 (MQ=255) ccggcgaatttaaagccaccagtactttccaggtaacctatccctgataaCGt > 1:1185069‑M1/51‑53 (MQ=255) gaatttaaagccaccagtactttccaggtaacctatccctgataaCGTAGCAGCACTg > 1:3805274‑M1/46‑58 (MQ=255) gTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTAT‑CGTAGCAGCACTGCCAGAAGGTGAc < 1:3241872/68‑1 (MQ=255) tCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGcc > 1:1571814/1‑58 (MQ=255) tCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGt < 1:1173424/71‑1 (MQ=255) tttaaagccaccagtactttccaggtaacctatccctgataaCGTa > 1:1178528‑M1/43‑46 (MQ=255) cTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGt < 1:1353047/45‑1 (MQ=255) cTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtg > 1:839168/1‑71 (MQ=255) ttaaagccaccagtactttccaggtaacctatccctgataaCGTAGCAGCACt > 1:3076353‑M1/42‑53 (MQ=255) gCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtgc < 1:2182628/69‑1 (MQ=255) cATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtgctgc > 1:2438674/1‑71 (MQ=255) cATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtgctgc > 1:2649579/1‑71 (MQ=255) cATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtgctgc > 1:1555747/1‑71 (MQ=255) ttttATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGcc < 1:1220113/51‑1 (MQ=255) tttATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtgctgc > 1:3162659/1‑68 (MQ=255) ccaccagtactttccaggtaacctatccctgataaCGTag > 1:2230776‑M1/36‑40 (MQ=255) tATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGt > 1:3414920/1‑71 (MQ=255) accagtactttccaggtaacctatccctgataaCGTagcagc > 1:1955229‑M1/34‑42 (MQ=255) accagtactttccaggtaacctatccctgataaCGTagcagc > 1:3242836‑M1/34‑42 (MQ=255) aTCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGa < 1:405203/50‑1 (MQ=255) tCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGc < 1:1560371/45‑1 (MQ=255) tCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGa < 1:2208370/55‑1 (MQ=255) agtactttccaggtaacctatccctgataaCGTAGCAGCACTGCCAGAAGGTGa < 1:3690866‑M1/24‑1 (MQ=255) aGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTAt < 1:21885/70‑1 (MQ=255) tCACATTGGTGGGGGCAATGATTTATCCGTAgcagca < 1:702652/37‑1 (MQ=255) tCACATCGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAg < 1:2363952/71‑1 (MQ=255) cacaTTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtg > 1:3120297/1‑55 (MQ=255) tttccaggtaacctatccctgataaCGTAGCAGCACTGCCAGAAGGTGACAg > 1:2435373‑M1/26‑52 (MQ=255) acaTTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGAc > 1:2863521/1‑50 (MQ=255) tccaggtaacctatccctgataaCGTAGCAGCACTGCCAGAAGGTGACAGtg < 1:2526288‑M1/29‑1 (MQ=255) tccaggtaacctatccctgataaCGTAGCAGCACTGCCAGAAGGTGACAGtg < 1:1377732‑M1/29‑1 (MQ=255) aTTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGa > 1:1549912/1‑70 (MQ=255) aTTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGAt < 1:1140088/71‑1 (MQ=255) ttGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAg < 1:404922/49‑1 (MQ=255) tggtggGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAgg > 1:1463234/1‑66 (MQ=255) tggtggGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAg > 1:2219776/1‑71 (MQ=255) ggtggGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAg < 1:886503/70‑1 (MQ=255) tggGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGtt < 1:2294346/71‑1 (MQ=255) tggGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGtt < 1:1153304/71‑1 (MQ=255) gggggCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtgct > 1:2052601/1‑48 (MQ=255) gggggCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGtgc > 1:2373307/1‑47 (MQ=255) ggggCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTAc < 1:2920881/71‑1 (MQ=255) gggCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTAcc < 1:2399371/71‑1 (MQ=255) gCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTACCTg < 1:224511/71‑1 (MQ=255) aaTGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAg > 1:967165/1‑38 (MQ=255) aaTGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGt < 1:3752306/39‑1 (MQ=255) aTGATTTATACGTATCAGCACTGCCAGAAGGTGACAg < 1:2005840/37‑1 (MQ=38) aTTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTACCTGGAAAg < 1:1107273/70‑1 (MQ=255) ccGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTAcc > 1:1208213/1‑57 (MQ=255) CGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTACCTGGAAAGTACtggt > 1:305057‑M1/1‑70 (MQ=255) | TATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGACAGTGCTGCTACGTTATCAGGGATAGGTTACCTGGAAAGTACTGGT > minE/134346‑134484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |