| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1958332 = | 36 (0.690) | 3 (0.070) | 3/88 | NT | 7.7% | coding (262/660 nt) | rpiA | ribosephosphate isomerase, constitutive |
| ? | minE | 1958358 = | 41 (0.920) | coding (236/660 nt) | rpiA | ribosephosphate isomerase, constitutive | |||||
CTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATG > minE/1958263‑1958402 | cactgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCg < 1:2692495‑M1/2‑1 (MQ=255) actgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGt < 1:2040074‑M1/3‑1 (MQ=255) ctgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:138865‑M1/68‑71 (MQ=255) cAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCg > 1:1909413/1‑68 (MQ=255) cAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGtt > 1:1480369/1‑70 (MQ=255) cAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGtt > 1:50784/1‑70 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTg > 1:1655462‑M1/65‑69 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGa > 1:2911388‑M1/65‑70 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGAt < 1:2345080‑M1/7‑1 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGAt < 1:536835‑M1/7‑1 (MQ=255) gAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTc < 1:659348/71‑1 (MQ=255) aaagcctcggcattcccgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGATTTCATCTgc < 1:921781‑M1/16‑1 (MQ=255) aTGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTgc > 1:389181/1‑71 (MQ=255) aTTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTgcgc > 1:3290585/1‑70 (MQ=255) ttttttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCa < 1:2506982/71‑1 (MQ=255) cctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCg < 1:385879‑M1/2‑1 (MQ=255) tcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCg > 1:2280158‑M1/50‑51 (MQ=255) tttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATc > 1:752256/1‑70 (MQ=255) ttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCaa > 1:334202/1‑71 (MQ=255) ttcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGATTTc > 1:3582254‑M1/44‑53 (MQ=255) ttcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGATTTc > 1:2864618‑M1/44‑53 (MQ=255) gggTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGTCCGtt < 1:2009994/46‑1 (MQ=255) gTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGcc < 1:629682/41‑1 (MQ=255) gTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGAt < 1:1297256/71‑1 (MQ=255) tCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAtt < 1:1625647/47‑1 (MQ=255) gtttttgatctcaacgaagtcgacagccttggcatctaCGt > 1:3247344‑M1/39‑41 (MQ=255) tttttgatctcaacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAAc > 1:1292574‑M1/38‑62 (MQ=255) aGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAtt > 1:3573725/1‑45 (MQ=255) aGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTc > 1:2779511/1‑47 (MQ=255) tttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:560088‑M1/36‑39 (MQ=255) cgcgccgcCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc > 1:3358903/1‑71 (MQ=255) cgcgccgcCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGc > 1:1281859/1‑71 (MQ=255) gcgccgcCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg < 1:3548376/60‑1 (MQ=255) ccgccgccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc < 1:735920/71‑1 (MQ=255) ccgccgccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc < 1:2110862/71‑1 (MQ=255) aacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAAc < 1:1511806‑M1/25‑1 (MQ=255) ccgccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGAc > 1:3340869/1‑71 (MQ=255) ccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 1:917574/50‑1 (MQ=255) ccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTc < 1:2491433/71‑1 (MQ=255) tttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTg < 1:631464/61‑1 (MQ=255) ttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGAc > 1:1636521/1‑65 (MQ=255) ttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:1210011/1‑71 (MQ=255) ttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:3340083/1‑71 (MQ=255) tGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:1563949/1‑70 (MQ=255) tGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGt > 1:1559384/1‑69 (MQ=255) tGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGt < 1:518028/69‑1 (MQ=255) gATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:2566675/1‑69 (MQ=255) gATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:2619728/1‑69 (MQ=255) aTCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:764237/1‑68 (MQ=255) cATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGa < 1:1930575/59‑1 (MQ=255) cATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGa < 1:2676108/59‑1 (MQ=255) cATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:2530402/1‑66 (MQ=255) aTTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGAt > 1:164622/1‑70 (MQ=255) gCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg > 1:3885981/1‑38 (MQ=255) gCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaa > 1:2862833/1‑70 (MQ=255) gCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaa > 1:1632709/1‑70 (MQ=255) aTGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAAc < 1:505731/71‑1 (MQ=255) tgGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTg < 1:3320087/71‑1 (MQ=255) tgGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTg < 1:890274/71‑1 (MQ=255) gCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAgg > 1:2354711/1‑40 (MQ=255) gCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAgg > 1:983614/1‑40 (MQ=255) ccGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGaa < 1:2081635/70‑1 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCt > 1:667212‑M1/1‑40 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATg > 1:2629266‑M1/1‑71 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATg > 1:2114011‑M1/1‑71 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGATGAGATCAAAAACGTGAATg > 1:3858902‑M1/1‑71 (MQ=255) | CTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATG > minE/1958263‑1958402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |