| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 5600 | 46 (0.890) | 15 (0.380) +ACGCTGCGATTT |
8/78 | NT | 29.4% | intergenic (+70/+83) | yaaX/yaaA | hypothetical protein/conserved hypothetical protein |
| ? | minE | 2636227 = | 48 (0.930) | intergenic (+47/‑51) | ugpB/ugpA | glycerol‑3‑phosphate transporter subunit/glycerol‑3‑phosphate transporter subunit | |||||
TTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCG > minE/2636158‑2636295 | ttGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg > 1:3450094/1‑71 (MQ=255) tGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg < 1:77229/70‑1 (MQ=255) tGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg > 1:1652366/1‑70 (MQ=255) tGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg < 1:1594364/70‑1 (MQ=255) tGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgt < 1:3767751/69‑1 (MQ=255) gagaAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg > 1:3228152/1‑69 (MQ=255) agaAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAg < 1:210025/71‑1 (MQ=255) gaAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAgg > 1:2057277/1‑71 (MQ=255) gaAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAgg < 1:136368/71‑1 (MQ=255) cgcatccggtatgtaacgcctgatgcgacgctgacgcgtcttatctggcctacacgctgcgatttTGTAgg < 1:2281548‑M2/6‑1 (MQ=255) cgcatccggtatgtaacgcctgatgcgacgctgacgcgtcttatctggcctacacgctgcgatttTGTAgg < 1:2440899‑M2/6‑1 (MQ=255) cgcatccggcattcaacgcctgatgcgacgctggcgcgtcttatcaggcctacgcgctgcgatttTGTAgg < 1:3492425‑M2/6‑1 (MQ=255) gcatccggtatgtaacgcctgatgcgacgctgacgcgtcttatctggcctacacgctgcgatttTGTAGGc < 1:759492‑M2/7‑1 (MQ=255) catccggcattcaacgcctgatgcgacgctggcgcgtcttatcaggcctacacgctgcgatttTGTAGGcc < 1:719446‑M2/8‑1 (MQ=255) aaTCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGc < 1:2820457/70‑1 (MQ=255) aTCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgt > 1:2461560/1‑63 (MQ=255) aTCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTa > 1:2913934/1‑66 (MQ=255) ccggcattcaacgcctgatgcgacgctggcgcgtcttatcaggcctacgcgctgcgatttTGTAGGCCGGa > 1:2010629‑M2/61‑71 (MQ=255) gacgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGa < 1:3612358/70‑1 (MQ=255) gacgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGAt < 1:3464807/71‑1 (MQ=255) gacgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGAt < 1:1847651/71‑1 (MQ=255) acgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGcc < 1:1180550/66‑1 (MQ=255) acgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGAt < 1:2134815/70‑1 (MQ=255) gcattcaacgcctgatgcgacgctggcgcgtcttatcaggcctacacgctgcgatttTGTAGGCCGGAt > 1:579630‑M2/58‑69 (MQ=255) cgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAg > 1:840763/1‑62 (MQ=255) cgaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaa < 1:1638607/71‑1 (MQ=255) gaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGGGTGTAGGCCGGATaag < 1:3751567/71‑1 (MQ=255) gaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgt < 1:3392987/57‑1 (MQ=255) gaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAgg > 1:800834/1‑62 (MQ=255) gaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAg > 1:2321140/1‑61 (MQ=255) gaAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaag < 1:3516056/71‑1 (MQ=255) attcaacgcctgatgcgacgctggcgcgtcttatcaggcctacgcgctgcgatttTGTAGGCCGGATaagc < 1:746257‑M2/16‑1 (MQ=255) caacgcctgatgcgacgctggcgcgtcttatcaggcctacgcgctgcgatttTGTAGGCCGGATaagc > 1:317321‑M2/53‑68 (MQ=255) aaTCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaagcgaagcg > 1:2163439/1‑70 (MQ=255) cAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCg > 1:847055/1‑54 (MQ=255) cAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATc > 1:1708105/1‑71 (MQ=255) cAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATc > 1:3620971/1‑71 (MQ=255) atgcgacgctggcgcgtcttatcaggcctacacgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATc < 1:11235‑M2/26‑1 (MQ=255) atgcgacgctgacgcgtcttatctggcctacacgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATCCg > 1:1996752‑M2/44‑71 (MQ=255) gtAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCgtg < 1:2772091/43‑1 (MQ=255) tAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGca < 1:771700/71‑1 (MQ=255) gacgctgacgcgtcttatctggcctacacgctgcgatttTGTAGGCCGGATaagc < 1:1042922‑M2/16‑1 (MQ=255) tGTCGGATTCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATa < 1:1305161/50‑1 (MQ=255) tGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATa < 1:2377378/50‑1 (MQ=255) cgctggcgcgtcttatcaggcctacacgctgcgatttTGTAGGCCGGATAAGCAAAGCGCATCCGgcacg > 1:1249894‑M2/38‑69 (MQ=255) tCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGtt < 1:2897187/71‑1 (MQ=255) gATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCgg < 1:458360/42‑1 (MQ=255) gATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCgg < 1:3444225/42‑1 (MQ=255) gATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAg > 1:3150116/1‑71 (MQ=255) aTGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAgg < 1:1114380/71‑1 (MQ=255) gCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCg > 1:192413/1‑38 (MQ=255) gCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCAt < 1:2670788/54‑1 (MQ=255) cGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATaagc < 1:168203/44‑1 (MQ=255) gTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAgg < 1:3476419/67‑1 (MQ=255) ttatcaggcctacgcgctgcgatttTGTAGGCCGGATAAGCAAAGCGCAt < 1:2102570‑M2/25‑1 (MQ=255) ttCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCa > 1:3249574/1‑63 (MQ=255) tCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAGGCGCATcc > 1:1044490/1‑51 (MQ=255) tCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAAc > 1:3330253/1‑71 (MQ=255) tCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAAc > 1:3371114/1‑71 (MQ=255) tcaggcctacgcgctgcgatttTGTAGGCCGGATAAGCAAAGCGCa < 1:165201‑M2/24‑1 (MQ=255) cTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCa < 1:445078/59‑1 (MQ=255) cTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGTAATTaa < 1:360485/67‑1 (MQ=255) cTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTaa < 1:363219/67‑1 (MQ=255) cTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTaa < 1:1258658/67‑1 (MQ=255) tATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGaa > 1:2098829/1‑61 (MQ=255) gACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtca > 1:2819246/1‑71 (MQ=255) aCCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtcat > 1:2887644/1‑71 (MQ=255) aCCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtc < 1:2624337/69‑1 (MQ=255) cTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTaa > 1:2069101/1‑57 (MQ=255) cTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtcatca < 1:261595/71‑1 (MQ=255) cTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtcatca < 1:2084227/71‑1 (MQ=255) gCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTcatcat < 1:441376/69‑1 (MQ=255) gCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCatcatc < 1:3188620/70‑1 (MQ=255) aTCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtcat > 1:1123209/1‑64 (MQ=255) aTCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGtcat > 1:1496474/1‑64 (MQ=255) aTCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTcatcat < 1:2103294/67‑1 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTaa > 1:856756/1‑49 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGt < 1:2579761/53‑1 (MQ=255) gcgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTaa < 1:3025269/55‑1 (MQ=255) cgTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCg < 1:384229/71‑1 (MQ=255) gtgtAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCg < 1:1624514/70‑1 (MQ=255) | TTGAGAAATCGACGAAGTCTTAATCAGTGTAATGTCGGATGCGTTTCGCTTATCTGACCTGGCATCGCGTGTAGGCCGGATAAGCGAAGCGCATCCGGCACAGTTCAGGAATTAACCGTAATGTCATCATCCCGTCCG > minE/2636158‑2636295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |