| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 5671 | 48 (0.930) | 18 (0.380) | 10/94 | NT | 35.9% | intergenic (+141/+12) | yaaX/yaaA | hypothetical protein/conserved hypothetical protein |
| ? | minE | 2094909 = | 20 (0.420) | intergenic (‑58/+394) | tdcG/rnpB | L‑serine dehydratase 3/RNase P | |||||
TGCACTAATCATATCCACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGA > minE/2094840‑2094979 | tGCACTAATCATATCCACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGa < 1:2069382/71‑1 (MQ=255) aCTAATCATATCCACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATa < 1:2131842/71‑1 (MQ=255) atatCCACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAgcgc < 1:2243558/70‑1 (MQ=255) tatattgaatttgcgtgcttttgtaggcaggataaggcgttcacgccgcatccggcatGAATAAAGCGCAc > 1:2025025‑M2/59‑71 (MQ=255) tCCACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGaa < 1:776372/59‑1 (MQ=255) tCCACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTc < 1:3130926/71‑1 (MQ=255) ccACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCa > 1:1550607/1‑67 (MQ=255) ttgaatttgcgtgcttttgtaggcaggataaggcgttcacgccgcatccggcatGAATAAAGCGCACTca < 1:3227803‑M2/16‑1 (MQ=255) gaatttgcgtgcttttgtaggcaggataaggcgttcacgccgcatccggcatGAATAAAGCGCACt > 1:1493863‑M2/53‑66 (MQ=255) aatttgcgtgcttttgtaggcaggataaggcgttcacgccgcatccggcatGAATAAAGCGCACTcaaca < 1:1098384‑M2/19‑1 (MQ=255) atttgcgtgcttttgtaggcaggataaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAAt < 1:258357‑M2/21‑1 (MQ=255) ccTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATc > 1:1783376/1‑71 (MQ=255) ccTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATc < 1:1365370/71‑1 (MQ=255) cGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTg < 1:1657961/70‑1 (MQ=255) ggATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGaa < 1:1822453/71‑1 (MQ=255) ggATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGa > 1:439654/1‑70 (MQ=255) ggATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGa < 1:3430249/70‑1 (MQ=255) gtgcttttgtaggcaggataaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGaaa < 1:444999‑M2/27‑1 (MQ=255) gtgcttttgtaggcaggataaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGaaa < 1:468809‑M2/27‑1 (MQ=255) gCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCTCACTCAACAATCTGAAAccc < 1:2239937/70‑1 (MQ=255) gCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAAccc < 1:2861330/70‑1 (MQ=255) cAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGa < 1:2324402/70‑1 (MQ=255) gTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAACCTGAAACCCGCCgg < 1:1200489/67‑1 (MQ=255) aggataaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGt > 1:1527521‑M2/31‑71 (MQ=255) aggataaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGt < 1:69107‑M2/41‑1 (MQ=255) ggataaggcgttcacgcctcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGtt < 1:398199‑M2/42‑1 (MQ=255) aaGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCgg < 1:1007934/64‑1 (MQ=255) gTGGGGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGaa > 1:3941781/1‑64 (MQ=255) ataaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTtta < 1:1364289‑M2/44‑1 (MQ=255) taaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGa > 1:2864997‑M2/27‑51 (MQ=255) taaggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGa > 1:3417531‑M2/27‑51 (MQ=255) gAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACccgccg > 1:1710795/1‑58 (MQ=255) aggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTttatta > 1:1562674‑M2/25‑71 (MQ=255) aggcgttcacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTttatta > 1:17419‑M2/25‑71 (MQ=255) gCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACg < 1:1955379/71‑1 (MQ=255) gCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACg < 1:836844/71‑1 (MQ=255) cacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACg > 1:1955216‑M2/18‑56 (MQ=255) cacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTtta > 1:535937‑M2/18‑61 (MQ=255) cacgccgcatccggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACAt > 1:2963388‑M2/18‑71 (MQ=255) cGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACAt > 1:3220295/1‑70 (MQ=255) cTTACGACGCATGAATAAAGCGCACTCAACAATCt > 1:3833193/1‑35 (MQ=255) acgacgCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTaa < 1:9397/70‑1 (MQ=255) gacgCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTa > 1:2480342/1‑58 (MQ=255) cggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAg > 1:468484‑M2/7‑63 (MQ=255) cggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAAc < 1:1494372‑M2/64‑1 (MQ=255) cggcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAAc < 1:1277008‑M2/64‑1 (MQ=255) cgCATGAATAAAGCGCACTCAACAATCTGAAACccgc > 1:871959/1‑37 (MQ=255) cgCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTttatta > 1:3799573/1‑52 (MQ=255) gcatGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGa > 1:1622411‑M2/5‑71 (MQ=255) catGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTtta < 1:3429042‑M2/44‑1 (MQ=255) tGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGtt > 1:709503‑M2/2‑43 (MQ=255) tGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATc < 1:784417‑M2/55‑1 (MQ=255) gAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGa > 1:1827834/1‑71 (MQ=255) | TGCACTAATCATATCCACACCCTCGGATTGCCGTTCAGTGAAGTGGAGCGGAACGACCTTACGACGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAACTGACCGA > minE/2094840‑2094979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |