| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 95431 | 85 (1.440) | 6 (0.110) | 4/92 | NT | 8.1% | coding (2413/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon |
| ? | minE | = 95447 | 59 (1.110) | coding (2429/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon | |||||
AGCGATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/95358‑95431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaacATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGCAGGTGGATACCCT < minE/95447‑95378 AGCGATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATAC > 1:704285/1‑70AGCGATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATAC > 1:2682122/1‑70 GATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAAC < 1:104795/71‑1 TCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACA < 1:3152555/59‑1 CGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACATGGAGAACGATT > 1:215609/1‑71 GTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACATGGAGAACGATTCACGTTT < 1:287459/71‑1 CACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACATGGAGAACGATTCACGTTTGTATT < 1:311253/71‑1 CACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACATGGAGAACGATTCACGTTT > 1:1465750/1‑66 CACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACATGGAGAACGATTCACGTTT > 1:1693963/1‑66 CACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACATGGAGAACGATTCACGTTT > 1:249873/1‑66 CACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAA < 1:2571570/44‑1 CAAACATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGCAGGTGGATA < 1:2381172/71‑1 CAAACATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGCAGGTGGA < 1:3588204/69‑1 AAACATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTC < 1:1139643/46‑1 AAACATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTC < 1:3519460/46‑1 AAACATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTC < 1:2316722/46‑1 AAACATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCT > 1:2368573/1‑43 AAACATGGAGAAAGATTCACGTTTGTATTCCTGCTTCGGATCT > 1:717538/1‑43 CATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGCAGGTGGATACCCT < 1:1950244/71‑1 CATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGC > 1:2451327/1‑58 CATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGC > 1:3607458/1‑58 CATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGC > 1:1278318/1‑58 CATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGC > 1:899463/1‑58 AGCGATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/95358‑95431‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaacATGGAGAACGATTCACGTTTGTATTCCTGCTTCGGATCTTTCTGTGCGTAGCCACGCAGGTGGATACCCT < minE/95447‑95378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |