| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 95431 | 85 (1.440) | 6 (0.110) | 4/92 | NT | 8.1% | coding (2413/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon |
| ? | minE | = 95447 | 59 (1.110) | coding (2429/2706 nt) | secA | preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon | |||||
CAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTAT > minE/95377‑95516 | cAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCAt > 1:178781/1‑71 (MQ=255) aGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATg < 1:1950244‑M2/71‑2 (MQ=255) tATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgtttg < 1:2381172‑M2/71‑6 (MQ=255) tCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgtttg < 1:3588204‑M2/69‑6 (MQ=255) tCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCa < 1:2309514/71‑1 (MQ=255) tCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCa < 1:3324780/71‑1 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGc > 1:1790099/1‑70 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGc > 1:623684/1‑70 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGc > 1:561042/1‑70 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCg < 1:1112007/71‑1 (MQ=255) aCCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCg < 1:1346484/71‑1 (MQ=255) tGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATg > 1:3411688/1‑71 (MQ=255) tGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATg > 1:2138650/1‑71 (MQ=255) tGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATg > 1:1006913/1‑71 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATg > 1:899463‑M2/1‑57 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATg > 1:1278318‑M2/1‑57 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATg > 1:3607458‑M2/1‑57 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATg > 1:2451327‑M2/1‑57 (MQ=255) gCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc > 1:1681583/1‑71 (MQ=255) cGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:775983/70‑1 (MQ=255) cGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:105726/70‑1 (MQ=255) cGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:306056/70‑1 (MQ=255) gTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTg < 1:71603/71‑1 (MQ=255) tGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTg > 1:1687651/1‑70 (MQ=255) cTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGt > 1:1386674/1‑71 (MQ=255) tACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTc > 1:2730860/1‑71 (MQ=255) cGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGt > 1:286683/1‑71 (MQ=255) acaGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTg > 1:3590701/1‑70 (MQ=255) acaGAAAGATCAGAAGCAGGAATAGAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTGGt < 1:1976049/68‑1 (MQ=255) caGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGa > 1:2735998/1‑70 (MQ=255) gAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgttt < 1:1139643‑M2/46‑5 (MQ=255) gAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgttt < 1:2316722‑M2/46‑5 (MQ=255) gAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgttt < 1:3519460‑M2/46‑5 (MQ=255) aGATCCGAAGCAGGAATACAAACGTGAATCTTTCTCCATgttt > 1:717538‑M2/1‑39 (MQ=255) aGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATgttt > 1:2368573‑M2/1‑39 (MQ=255) aGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATg < 1:1195160/71‑1 (MQ=255) gATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATg > 1:3305895/1‑70 (MQ=255) tCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAg < 1:2098347/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:2845415/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:3046821/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:1071692/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:1880430/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:2437857/71‑1 (MQ=255) cGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGtt < 1:1291248/71‑1 (MQ=255) gAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTa > 1:3221242/1‑71 (MQ=255) aaGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGc < 1:2667306/46‑1 (MQ=255) aaGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTAt < 1:51735/71‑1 (MQ=255) aaGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTAt < 1:384266/71‑1 (MQ=255) aGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATc < 1:1498429/71‑1 (MQ=255) cAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg < 1:3650638/71‑1 (MQ=255) cAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg < 1:1009822/71‑1 (MQ=255) aGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg > 1:2031420/1‑70 (MQ=255) gAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTAc < 1:1367090/71‑1 (MQ=255) gAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTAc < 1:36527/71‑1 (MQ=255) gAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTAc < 1:636986/71‑1 (MQ=255) gAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTAc < 1:1620544/71‑1 (MQ=255) aaTACAAACGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtg < 1:311253‑M2/71‑47 (MQ=255) aTACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGc > 1:1052784/1‑71 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTc > 1:2516419/1‑44 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGa < 1:1961312/49‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGa < 1:2487661/49‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg < 1:653442/65‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAg < 1:2247915/65‑1 (MQ=255) tACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCt < 1:3501431/71‑1 (MQ=255) cAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTg < 1:148888/70‑1 (MQ=255) cAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTg < 1:347105/70‑1 (MQ=255) aaaCGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtggatac < 1:287459‑M2/71‑52 (MQ=255) aaaCGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtg > 1:1693963‑M2/1‑20 (MQ=255) aaaCGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtg > 1:249873‑M2/1‑20 (MQ=255) aaaCGTGAATCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtg > 1:1465750‑M2/1‑20 (MQ=255) aaCGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCt > 1:3602456/1‑67 (MQ=255) aaCGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAg > 1:3428402/1‑70 (MQ=255) aCGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAatat > 1:3000019/1‑49 (MQ=255) aCGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGc > 1:1565810/1‑70 (MQ=255) aCGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGc > 1:1896145/1‑70 (MQ=255) gAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGt > 1:2308144/1‑71 (MQ=255) aaTCGTTCTCCATgtttgtattcctgcttcggatctttctgtgcgtagccacgcaggtggataccctgacg > 1:215609‑M2/1‑13 (MQ=255) aaTCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCa > 1:1855342/1‑54 (MQ=255) aaTCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGtt < 1:2144008/71‑1 (MQ=255) aaTCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGtt < 1:276584/71‑1 (MQ=255) aaTCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGtt < 1:3689714/71‑1 (MQ=255) aaTCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGtt < 1:3112375/71‑1 (MQ=255) aaTCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGtt < 1:1669253/71‑1 (MQ=255) gTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAgg < 1:802303/71‑1 (MQ=255) ctcCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTa > 1:70651/1‑70 (MQ=255) ccATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTg > 1:1249152/1‑53 (MQ=255) aTGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACg < 1:2035151/68‑1 (MQ=255) aTGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTAt < 1:1168074/71‑1 (MQ=255) aTGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTAt > 1:1346513/1‑71 (MQ=255) tGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACg > 1:207290/1‑47 (MQ=255) tGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACg > 1:1232091/1‑47 (MQ=255) | CAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTAT > minE/95377‑95516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |