| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 177042 | 48 (0.810) | 3 (0.060) | 3/90 | NT | 6.5% | coding (290/2433 nt) | yaeT | conserved hypothetical protein |
| ? | minE | = 177076 | 44 (0.850) | coding (324/2433 nt) | yaeT | conserved hypothetical protein | |||||
AGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/176970‑177042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcatGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTGGCAATGGTCGGACGTTCTTTTACCTGA < minE/177076‑177010 AGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGC < 1:141655/71‑1AGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGC < 1:475812/71‑1AGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAG < 1:3441444/70‑1 GATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGC < 1:3287385/69‑1 TGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCC < 1:1740145/49‑1 TACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCA > 1:2890370/1‑44 TACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCA > 1:3723702/1‑44 TACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCA > 1:13116/1‑41 AGGTAAAAGAACGTCCGACCATTGCCAGCATGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTG < 1:343068/71‑1 AGGTAAAAGAACGTCCGACCATTGCCAGCATGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCT < 1:3699471/70‑1 TAAAAGAACGTCCGACCATTGCCAGCATGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTGGCA < 1:3404153/71‑1 CAGCATGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTGGCAATGGTCGGACGTTCTTTTACCT > 1:3155091/1‑71 GCATGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTGGCAATGGTCGGACGTTCTTTTACCTGA < 1:1648279/71‑1 TGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTGGCA < 1:1611378/44‑1 TGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTGG < 1:2275129/42‑1 AGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/176970‑177042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcatGTCATCTTTCACCGATTTGTTACCGGAGAAAGTAATGCTGGCAATGGTCGGACGTTCTTTTACCTGA < minE/177076‑177010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |