| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 177042 | 48 (0.810) | 3 (0.060) | 3/90 | NT | 6.5% | coding (290/2433 nt) | yaeT | conserved hypothetical protein |
| ? | minE | = 177076 | 44 (0.850) | coding (324/2433 nt) | yaeT | conserved hypothetical protein | |||||
TCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGCC > minE/177010‑177145 | tCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACatgc < 1:1648279‑M2/71‑5 (MQ=255) aGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACatgctg > 1:3155091‑M2/1‑65 (MQ=255) aaaaGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAg > 1:2781439/1‑70 (MQ=255) aaaaGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAg > 1:3168080/1‑70 (MQ=255) aaaGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGc > 1:1278940/1‑70 (MQ=255) aaGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGAc > 1:2765780/1‑59 (MQ=255) aaGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGAc > 1:3022510/1‑59 (MQ=255) aaCGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAAc > 1:3374446/1‑71 (MQ=255) aCGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAAc < 1:2022226/70‑1 (MQ=255) cGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCt < 1:2248759/71‑1 (MQ=255) cGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCt < 1:2824848/71‑1 (MQ=255) gTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTc < 1:415523/71‑1 (MQ=255) ccGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTc > 1:31397/1‑69 (MQ=255) ccGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTc > 1:199290/1‑69 (MQ=255) ccGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTc > 1:126851/1‑69 (MQ=255) ccGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTc > 1:203723/1‑69 (MQ=255) ccGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTc > 1:35772/1‑69 (MQ=255) ccGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTc > 1:2668138/1‑69 (MQ=255) ccATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAAc > 1:598239/1‑62 (MQ=255) tGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACatgctggcaatggtcggacgttctttta < 1:3404153‑M2/71‑29 (MQ=255) tGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACa < 1:1611378‑M2/44‑2 (MQ=255) ccAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACa < 1:2275129‑M2/42‑2 (MQ=255) ccAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGgt < 1:216696/71‑1 (MQ=255) ccAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGgt < 1:1227118/71‑1 (MQ=255) cAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACatgctggcaatggtcggacgttcttttacct < 1:343068‑M2/71‑32 (MQ=255) cAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGgt < 1:838786/70‑1 (MQ=255) aGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACatgctggcaatggtcggacgttcttttacct < 1:3699471‑M2/70‑32 (MQ=255) cATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGc > 1:3336780/1‑71 (MQ=255) aCTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCgtgt > 1:580536/1‑71 (MQ=255) cTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCgtgt < 1:580222/70‑1 (MQ=255) cTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGtgtg < 1:3422235/71‑1 (MQ=255) cTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGtgtg < 1:607604/71‑1 (MQ=255) tctcCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGc > 1:2734833/1‑71 (MQ=255) tctcCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGc > 1:2356818/1‑71 (MQ=255) gTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGtgtg > 1:990001/1‑56 (MQ=255) gTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATcc > 1:501734/1‑71 (MQ=255) aaCAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCt > 1:739062/1‑71 (MQ=255) aCAAATCGGTGAAAGATGACATGCTGAAGCAAAAc < 1:1985174/35‑1 (MQ=255) cAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTc < 1:906753/70‑1 (MQ=255) cAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTc < 1:3699878/70‑1 (MQ=255) cAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTC‑‑GGCTTCTGGTGTGCGTGTGGGCGAATCCCTc < 1:2520715/68‑1 (MQ=255) aaaTCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAg > 1:1358168/1‑39 (MQ=255) aaaTCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGaa < 1:2141402/63‑1 (MQ=255) aaaTCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGaa < 1:3658447/63‑1 (MQ=255) aTCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATc > 1:1526051/1‑71 (MQ=255) tCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCtt < 1:3681593/40‑1 (MQ=255) tCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCtt < 1:2027961/40‑1 (MQ=255) tCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCg < 1:110566/71‑1 (MQ=255) tCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCg < 1:1584588/71‑1 (MQ=255) ggTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTc < 1:2995890/64‑1 (MQ=255) gTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGcac > 1:409020/1‑71 (MQ=255) tGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCg < 1:3256526/54‑1 (MQ=255) aaGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGtgtg < 1:2021810/47‑1 (MQ=255) aaGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGtgtg < 1:621625/47‑1 (MQ=255) aaGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGtgtg < 1:2327547/47‑1 (MQ=255) aaGATGACATGCTGAAGCAAAACCTCGAAGCTTCTGGTGTGCGtgtg < 1:877364/47‑1 (MQ=255) aTGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCAtt > 1:377419/1‑71 (MQ=255) aCATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGcc < 1:1102667/71‑1 (MQ=255) aCATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGcc < 1:338175/71‑1 (MQ=255) | TCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGCC > minE/177010‑177145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |