| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 206326 | NA (NA) | 6 (0.110) | 3/92 | NT | NA | noncoding (1743/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | minE | = 206343 | NA (NA) | noncoding (1760/2904 nt) | rrlH | 23S ribosomal RNA | |||||
ACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/206252‑206326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCGA < minE/206343‑206276 ACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGA < 1:3223505/71‑1 CTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAG > 1:3001060/1‑71 CTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGATGATATGTAGGTGAAGCGACTTGCTCGTGGAG > 1:1668689/1‑71 TAGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGA > 1:2334932/1‑69 AGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT > 1:3349798/1‑71 AGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT > 1:2927170/1‑71 AGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT > 1:2541378/1‑71 GGCAAAATGGTGCAGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT > 1:2470751/1‑70 GCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG > 1:1595095/1‑70 AAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT < 1:3577447/67‑1 AAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT > 1:1314348/1‑66 AAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT > 1:2935034/1‑66 AATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGC > 1:1771763/1‑64 TGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAG < 1:2936372/61‑1 TGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAG < 1:3641616/61‑1 ACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAG > 1:424548/1‑51 TTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGA < 1:1890094/48‑1 GAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTGGTATCTTCGACTGATTTCAGCTCC < 1:198544/71‑1 GAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG < 1:1810661/47‑1 GAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG < 1:1540634/47‑1 AGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGA < 1:2200097/42‑1 AGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGA < 1:63947/42‑1 GGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT < 1:2335883/41‑1 GGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCT < 1:3496507/41‑1 CGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTGGTATCTTCGACTGATTTCAGCTCCA > 1:2223592/1‑63 CTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG > 1:3072924/1‑36 CTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG > 1:119540/1‑36 CTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG > 1:505898/1‑36 GATATGTAGGTGAAGCGACTTGCTCGTGGAGCTGGTATCTTCGACTGATTT > 1:27972/1‑51 GATATGTAGGTGAAGCGACTTGCTCGTGGAGCTGGTATCTTCGACTGATTT > 1:370926/1‑51 GATATGTAGGTGAAGCGACTTGCTCGTGGAGCTGGTATCTTCGACTGATTT > 1:2047588/1‑51 GATATGTAGGTGAAGCGACTTGCTCGTGGAGCTGGTATCTTCGACTGATTT > 1:455728/1‑51 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCC > 1:973782/1‑71 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCC > 1:750379/1‑71 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCC < 1:3000201/71‑1 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTT > 1:2150621/1‑66 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCATCTCCC > 1:1008645/1‑71 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGC > 1:1011862/1‑63 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATC < 1:3048595/56‑1 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATC < 1:596914/56‑1 AGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATC < 1:1095733/56‑1 CTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCGA < 1:3161473/71‑1 CTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCGA < 1:90148/71‑1 CTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCGA < 1:933391/71‑1 TGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCG > 1:1741461/1‑69 TGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCG > 1:1143392/1‑69 ACTAGGCAAAATGGTGCCGTAACTTCGGGAGAAGGCACGCTGATATGTAGGTGAAGCGACTTGCTCGTGGAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/206252‑206326‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCGA < minE/206343‑206276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |