| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 257914 | 63 (1.070) | 7 (0.130) | 3/92 | NT | 9.3% | coding (1799/1848 nt) | secD | SecYEG protein translocase auxillary subunit |
| ? | minE | = 257928 | 80 (1.500) | coding (1813/1848 nt) | secD | SecYEG protein translocase auxillary subunit | |||||
TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/257840‑257914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG < minE/257928‑257860 TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTG > 1:2460948/1‑71TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTG > 1:844052/1‑71TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTG > 1:1916173/1‑71 AAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC > 1:174130/1‑70 CGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAG > 1:2655495/1‑70 CGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAG > 1:1236810/1‑70 CGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAG > 1:1450251/1‑70 CGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC < 1:392989/61‑1 CGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC < 1:3046378/61‑1 CGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC < 1:199050/61‑1 TATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCA < 1:1045986/71‑1 TCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCAC < 1:122381/70‑1 TCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCAC < 1:1133088/70‑1 TCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATGGCAC < 1:3184601/70‑1 GGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGC < 1:2300323/44‑1 TTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATG > 1:1794466/1‑46 TTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATG > 1:2889109/1‑46 TTTACCGCGATTGTCGGTACGCGTGCCATATAGCAGGTTTACGATG > 1:521157/1‑46 GCCATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATAC > 1:1797739/1‑71 GCCATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATAC > 1:3686590/1‑71 CCATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACC < 1:1026809/71‑1 CATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCG > 1:1098385/1‑71 ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG < 1:846243/71‑1 ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG < 1:911545/71‑1 ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG < 1:2122897/71‑1 ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG < 1:1800009/71‑1 ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTA < 1:846369/43‑1 ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTA < 1:1586136/43‑1 ATATAGCAGGTTTACGATGGCACGCGTACCGACAATCGC < 1:3414120/39‑1 TAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/257840‑257914‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatATAGCAGGTTTACGATGGCACGCGTACCGACAATCGCGGTAAACATCGACGTCGCCACACCGATACCGG < minE/257928‑257860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |