| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 257914 | 63 (1.070) | 7 (0.130) | 3/92 | NT | 9.3% | coding (1799/1848 nt) | secD | SecYEG protein translocase auxillary subunit |
| ? | minE | = 257928 | 80 (1.500) | coding (1813/1848 nt) | secD | SecYEG protein translocase auxillary subunit | |||||
Only 100 of 128 total aligned reads displayed.
TTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAGGA > minE/257847‑257984 | ttCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCg > 1:160821/1‑70 (MQ=255)ttCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCg > 1:336537/1‑70 (MQ=255)ttCGCGAGTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCg > 1:2210673/1‑70 (MQ=255) cgcgATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATatag > 1:1450251‑M1/1‑66 (MQ=255) cgcgATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATatag > 1:2655495‑M1/1‑66 (MQ=255) cgcgATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATatag > 1:1236810‑M1/1‑66 (MQ=255) cgcgATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTa < 1:1788448/70‑1 (MQ=255) cgcgATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTa > 1:4640/1‑70 (MQ=255) cgcgATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTa > 1:1466061/1‑70 (MQ=255) cgcgATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTa > 1:2288291/1‑70 (MQ=255) cgcgACTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTa > 1:1394200/1‑70 (MQ=255) aTTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCt > 1:620710/1‑71 (MQ=255) aTTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCt > 1:133795/1‑71 (MQ=255) ttACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTg > 1:3734801/1‑71 (MQ=255) ttACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTg > 1:560770/1‑71 (MQ=255) ttACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTg > 1:493532/1‑71 (MQ=255) ttACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTg > 1:2625112/1‑71 (MQ=255) tactacCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGc > 1:619058/1‑71 (MQ=255) actacCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGc < 1:1404820/70‑1 (MQ=255) ctacCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCta < 1:2632734/71‑1 (MQ=255) acCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCt > 1:2300151/1‑68 (MQ=255) ccGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATat < 1:2122897‑M2/71‑3 (MQ=255) ccGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATat < 1:846243‑M2/71‑3 (MQ=255) ggTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATatgg < 1:1026809‑M2/71‑5 (MQ=255) gTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATatggc > 1:3686590‑M2/1‑66 (MQ=255) gTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATatggc > 1:1797739‑M2/1‑66 (MQ=255) tATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATatagcaggtttacgatggca < 1:1045986‑M1/71‑21 (MQ=255) tCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATatagcaggtttacgatggcac < 1:1133088‑M1/70‑22 (MQ=255) tCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATatagcaggtttacgatggcac < 1:122381‑M1/70‑22 (MQ=255) ggTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATggcggc > 1:397705/1‑69 (MQ=255) ggTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATggcgg > 1:2830307/1‑68 (MQ=255) ggTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATggcgg > 1:322495/1‑68 (MQ=255) tgtgGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAgc > 1:106492/1‑71 (MQ=255) gtgGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAgc > 1:1583112/1‑70 (MQ=255) cGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCaag < 1:3075128/71‑1 (MQ=255) cGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCaag < 1:354989/71‑1 (MQ=255) cGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCaag < 1:3473974/71‑1 (MQ=255) cGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCaag < 1:1780401/71‑1 (MQ=255) cGTCGATGTTTACCGCGATTGTCGGTACGCGGGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCaag < 1:2834067/71‑1 (MQ=255) gTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCaaga < 1:1320720/71‑1 (MQ=255) tCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGcgcg < 1:3559282/64‑1 (MQ=255) tCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGcgcg < 1:3039406/64‑1 (MQ=255) gATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCaagaag < 1:875834/70‑1 (MQ=255) gATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGc > 1:105896/1‑71 (MQ=255) gATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGc > 1:1569877/1‑71 (MQ=255) aTGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCt < 1:2802265/71‑1 (MQ=255) tttACCGCGATTGTCGGTACGCGTGCCATatagcaggtttacgatg > 1:2889109‑M1/1‑29 (MQ=255) tttACCGCGATTGTCGGTACGCGTGCCATatagcaggtttacgatg > 1:1794466‑M1/1‑29 (MQ=255) tttACCGCGATTGTCGGTACGCGTGCCATatagcaggtttacgatg > 1:521157‑M1/1‑29 (MQ=255) tACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATat < 1:1586136‑M2/43‑3 (MQ=255) tACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCa < 1:2386956/70‑1 (MQ=255) tACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCa < 1:2733795/70‑1 (MQ=255) ccGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATc < 1:2911741/71‑1 (MQ=255) cgcgATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAAt > 1:182371/1‑69 (MQ=255) gcgATTGTCGGTACGCGTGCCATCGTAAACCTGCTATat < 1:3414120‑M2/39‑3 (MQ=255) gcgATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTg < 1:3097034/71‑1 (MQ=255) gcgATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTg < 1:133541/71‑1 (MQ=255) gcgATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTg < 1:2117400/71‑1 (MQ=255) gcgATTGTCGGTACGCGTGCCATCGTAAACCTGCTACATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTg < 1:2607065/71‑1 (MQ=255) cgATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGcgcg < 1:3125757/51‑1 (MQ=255) cgATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCt > 1:2451202/1‑69 (MQ=255) aTTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTgagg < 1:3657244/71‑1 (MQ=255) cGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGc > 1:1212802/1‑71 (MQ=255) cGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGc > 1:2342997/1‑71 (MQ=255) tACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGAt > 1:191093/1‑71 (MQ=255) aCGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCTTCAAGAAGCTGTCAATCTGAGGAGTGCGAtg > 1:883304/1‑71 (MQ=255) cgcgTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGAtgt < 1:1562495/71‑1 (MQ=255) gTGCCATCGTAAACCTGCTATatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccga < 1:3184601‑M2/70‑50 (MQ=255) gTGCCATCGTAAACCTGCTATatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccga < 1:122381‑M2/70‑50 (MQ=255) gTGCCATCGTAAACCTGCTATatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccga < 1:1133088‑M2/70‑50 (MQ=255) gTGCCATCGTAAACCTGCTATATGTCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGAtgt < 1:3134125/68‑1 (MQ=255) gTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGc < 1:40938/71‑1 (MQ=255) gTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGc < 1:834337/71‑1 (MQ=255) tGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATc < 1:1835874/52‑1 (MQ=255) gCCATatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgatac > 1:3686590‑M1/1‑5 (MQ=255) gCCATatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgatac > 1:1797739‑M1/1‑5 (MQ=255) ccATatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgatacc < 1:1026809‑M1/71‑68 (MQ=255) ccATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGcaca < 1:1089684/71‑1 (MQ=255) cATatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgataccg > 1:1098385‑M1/1‑3 (MQ=255) cATCGTAAACCTGCTATatggcacgcgtaccgacaatcgcggtaaa > 1:2889109‑M2/1‑17 (MQ=255) cATCGTAAACCTGCTATatggcacgcgtaccgacaatcgcggtaaa > 1:1794466‑M2/1‑17 (MQ=255) cATCGTAAACCTGCTATatggcacgcgtaccgacaatcgcggtaaa > 1:521157‑M2/1‑17 (MQ=255) cATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTgaggag < 1:1020393/56‑1 (MQ=255) cATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGca > 1:3232062/1‑68 (MQ=255) atatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgataccgg < 1:1800009‑M1/71‑70 (MQ=255) atatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgataccgg < 1:911545‑M1/71‑70 (MQ=255) atatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgataccgg < 1:846243‑M1/71‑70 (MQ=255) atatagcaggtttacgatggcacgcgtaccgacaatcgcggtaaacatcgacgtcgccacaccgataccgg < 1:2122897‑M1/71‑70 (MQ=255) atatagcaggtttacgatggcacgcgtaccgacaatcgcggta < 1:1586136‑M1/43‑42 (MQ=255) atatagcaggtttacgatggcacgcgtaccgacaatcgcggta < 1:846369‑M1/43‑42 (MQ=255) atatagcaggtttacgatggcacgcgtaccgacaatcgc < 1:3414120‑M1/39‑38 (MQ=255) aTCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGcaca > 1:3633755/1‑69 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCaag < 1:3566908/35‑1 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGc > 1:1374862/1‑57 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAgg > 1:2164014/1‑70 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAgg > 1:1145511/1‑70 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAgg < 1:3232930/70‑1 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAGGa < 1:1943489/71‑1 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAGGa < 1:3077042/71‑1 (MQ=255) tCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAGGa < 1:3157808/71‑1 (MQ=255) | TTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGAGGAGTGCGATGTGGCACAGGA > minE/257847‑257984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |