| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 869212 | 51 (0.860) | 10 (0.190) | 4/92 | NT | 18.2% | coding (927/1050 nt) | sohB | predicted inner membrane peptidase |
| ? | minE | = 869257 | 44 (0.830) | coding (972/1050 nt) | sohB | predicted inner membrane peptidase | |||||
GCGGTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/869138‑869212‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaaTCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACTTCACGGCCTTCCATCAGGCTAAG < minE/869257‑869189 GCGGTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCG < 1:3214600/71‑1GCGGTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCG > 1:3118783/1‑71 GGTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTG < 1:2876225/71‑1 GTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGA < 1:1570583/71‑1 GTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGA < 1:390519/71‑1 GTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGA < 1:3695654/71‑1 TAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGT < 1:49397/68‑1 AGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGT > 1:3194906/1‑61 TGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAATCGGTCAATGAG > 1:353092/1‑71 TTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTG < 1:1718330/54‑1 TTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTG < 1:3601083/54‑1 ATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTA < 1:2821860/70‑1 ATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTA < 1:2490003/70‑1 ATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAATCGGGCAATGAGTCGTTTACGCTGCATATAGCGTA < 1:3704352/70‑1 TTAGCCTGATGGAAGGCCGTGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGCCCACTT > 1:2275971/1‑70 TTAGCCTGATGGAAGGCCGTGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACT > 1:1933588/1‑69 TTAGCCTGATGGAAGGCCGTGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACT > 1:862524/1‑69 TTAGCCTGATGGAAGGCCGTGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACA > 1:1286086/1‑60 TTAGCCTGATGGAAGGCCGTGAATCGGACAATGAGTCGTTTAAGCTGCATATAGCGGACA > 1:2079745/1‑60 AGCCTGATGGAAGGCCGTGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACTT < 1:2080740/68‑1 TGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACTTCACGGCCTTCCATCAGGCT > 1:429310/1‑70 TGAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTA < 1:1638972/39‑1 TGAATCGGTCAATGAGTCGTTTACGCTGCATATAG > 1:3338148/1‑35 GAATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACTTCACGGCCTTCCATCAGGCT > 1:80940/1‑69 AATCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACTTCACGGCCTTCCATCAGGCTAAG < 1:617305/71‑1 GCGGTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/869138‑869212‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgaaTCGGTCAATGAGTCGTTTACGCTGCATATAGCGTACATTGACCACTTCACGGCCTTCCATCAGGCTAAG < minE/869257‑869189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |