| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 882505 = | 35 (0.590) | 4 (0.090) | 3/78 | NT | 14.3% | intergenic (‑223/+46) | osmB/yciT | lipoprotein/predicted DNA‑binding transcriptional regulator |
| ? | minE | 882535 = | 21 (0.470) | intergenic (‑253/+16) | osmB/yciT | lipoprotein/predicted DNA‑binding transcriptional regulator | |||||
CACAGTAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/882586‑882505‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATC > minE/882535‑882604 CACAGTAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGG < 1:2235890/71‑1CACAGTAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGG < 1:3348212/71‑1 ACAGTAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGG > 1:1627480/1‑70 CAGTAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCA < 1:2499746/71‑1 GTAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAA < 1:1574556/71‑1 TAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAAT > 1:3653537/1‑71 TAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAA < 1:3177093/70‑1 AACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATC < 1:3249864/70‑1 AACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATC < 1:3253971/70‑1 ACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCATCC < 1:344573/69‑1 ACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCATCC < 1:2187446/69‑1 ACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCATCC < 1:1890076/69‑1 ACCATTCACGTCGTTGACATTTAACCATTTACCTTCTCTACGGATGATTTGCAGTTTGGCAAATCATCC < 1:2484458/69‑1 CACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCA > 1:3300251/1‑60 CACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCA > 1:384413/1‑60 CACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCA > 1:1003916/1‑60 GTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGC < 1:365022/51‑1 GTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGC < 1:1678191/51‑1 ACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCA < 1:2038836/45‑1 ACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCA < 1:3046831/45‑1 CCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAAT < 1:405314/40‑1 TTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCATCC < 1:2206837/41‑1 TCCCTTCTCTACGGATGATTTGCAGTTTGGCAAAT < 1:3015839/35‑1 TGATTTGCAGTTTGGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAA < 1:2050853/62‑1 TTTGCAGTTTGGCAAATCATCCGTAGAGAAGGGAAAT < 1:3635802/37‑1 TGCAGTTTGGCAAATCATCCGTAGAGAAGGGAAATGG > 1:587694/1‑37 TGCAGTTTGGCAAATCATCCGTAGAGAAGGGAAATGG > 1:1255424/1‑37 GCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTC > 1:1906381/1‑67 CAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGAT < 1:1860643/71‑1 CAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGAT > 1:1450030/1‑71 CAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGAT < 1:1178834/71‑1 AAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTAATGTGCTCAAGA > 1:2120126/1‑69 AATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATG > 1:2956489/1‑70 AATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATG > 1:3565086/1‑70 ATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCA < 1:1054689/71‑1 TCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCAT < 1:229553/71‑1 CGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCAT < 1:295193/66‑1 GTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATC < 1:289685/71‑1 GTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATC < 1:2330764/71‑1 GTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATC < 1:1998710/71‑1 CACAGTAAACTCACCATTCACGTCGTTGACATTTAACCATTTCCCTTCTCTACGGATGATTTGCAGTTTGGCAAATCATCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/882586‑882505‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATC > minE/882535‑882604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |