| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 882505 = | 35 (0.590) | 4 (0.090) | 3/78 | NT | 14.3% | intergenic (‑223/+46) | osmB/yciT | lipoprotein/predicted DNA‑binding transcriptional regulator |
| ? | minE | 882535 = | 21 (0.470) | intergenic (‑253/+16) | osmB/yciT | lipoprotein/predicted DNA‑binding transcriptional regulator | |||||
ATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATC > minE/882470‑882604 | aTAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAgaga < 1:1007482/71‑1 (MQ=255) gTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAgg > 1:320087/1‑71 (MQ=255) tAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGaaa > 1:3433845/1‑71 (MQ=255) tAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGaaa > 1:2645836/1‑71 (MQ=255) aTTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAAt < 1:1991598/70‑1 (MQ=255) aTCAACCAGGAATCGTCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGt < 1:565079/70‑1 (MQ=255) aaCCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTaaa > 1:253999/1‑71 (MQ=255) ccAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATg < 1:3485810/71‑1 (MQ=255) ccAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATg > 1:3327141/1‑71 (MQ=255) ccAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATg > 1:2428471/1‑71 (MQ=255) tAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:1337993/1‑71 (MQ=255) tAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:2541018/1‑71 (MQ=255) tAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:3351748/1‑71 (MQ=255) agagCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGa < 1:763540/69‑1 (MQ=255) agagCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGa < 1:1497566/69‑1 (MQ=255) gagCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATg < 1:740247/71‑1 (MQ=255) agCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATgg > 1:3155802/1‑71 (MQ=255) gCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2289611/71‑1 (MQ=255) gCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2606994/71‑1 (MQ=255) gCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2293988/71‑1 (MQ=255) GGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGTAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2484458‑M1/69‑1 (MQ=255) GGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGaa < 1:2206837‑M1/41‑1 (MQ=255) GGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:344573‑M1/69‑1 (MQ=255) GGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:1890076‑M1/69‑1 (MQ=255) GGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGt < 1:2187446‑M1/69‑1 (MQ=255) tgatttgcagtttggcaaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa < 1:2050853‑M2/36‑1 (MQ=255) TGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTg > 1:1003916‑M1/1‑60 (MQ=255) TGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTg > 1:3300251‑M1/1‑60 (MQ=255) TGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTg > 1:384413‑M1/1‑60 (MQ=255) GATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGtt < 1:3249864‑M1/70‑1 (MQ=255) GATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGtt < 1:3253971‑M1/70‑1 (MQ=255) ATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGa < 1:3015839‑M1/35‑1 (MQ=255) ATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATgg < 1:405314‑M1/40‑1 (MQ=255) ATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTa > 1:3653537‑M1/1‑71 (MQ=255) tttgcagtttggcaaatcatccgTAGAGAAGGGAAAt < 1:3635802‑M2/14‑1 (MQ=255) TTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTa < 1:3177093‑M1/70‑1 (MQ=255) TTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTAc < 1:1574556‑M1/71‑1 (MQ=255) tgcagtttggcaaatcatccgTAGAGAAGGGAAATgg > 1:1255424‑M2/22‑37 (MQ=255) tgcagtttggcaaatcatccgTAGAGAAGGGAAATgg > 1:587694‑M2/22‑37 (MQ=255) TGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGt < 1:2038836‑M1/45‑1 (MQ=255) TGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGt < 1:3046831‑M1/45‑1 (MQ=255) TGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACtg < 1:2499746‑M1/71‑1 (MQ=255) GCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAacgac < 1:1678191‑M1/51‑1 (MQ=255) GCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAacgac < 1:365022‑M1/51‑1 (MQ=255) CCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACtgtg < 1:2235890‑M1/71‑1 (MQ=255) CCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACtgtg < 1:3348212‑M1/71‑1 (MQ=255) CCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACtgt > 1:1627480‑M1/1‑70 (MQ=255) cAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGc > 1:3301474/1‑71 (MQ=255) aaaCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCt < 1:3176230/71‑1 (MQ=255) aaCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:466688/1‑52 (MQ=255) aaCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGaa > 1:471075/1‑52 (MQ=255) aaCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCt > 1:39503/1‑70 (MQ=255) aaCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCt > 1:3394817/1‑70 (MQ=255) aaCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTc < 1:2251672/71‑1 (MQ=255) aaCTCCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTc < 1:3188509/71‑1 (MQ=255) aCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTc > 1:3128990/1‑70 (MQ=255) aCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTc > 1:491253/1‑70 (MQ=255) aCTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCa < 1:3725625/71‑1 (MQ=255) cTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTTAGTTTACTGTGCTCaa < 1:94448/71‑1 (MQ=255) cTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTc < 1:192293/69‑1 (MQ=255) gcaaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTc > 1:1906381‑M2/13‑67 (MQ=255) caaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGAt < 1:1178834‑M2/60‑1 (MQ=255) caaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGAt > 1:1450030‑M2/12‑71 (MQ=255) caaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGAt < 1:1860643‑M2/60‑1 (MQ=255) aaatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTAATGTGCTCAAGa > 1:2120126‑M2/11‑69 (MQ=255) aatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATg > 1:2956489‑M2/10‑70 (MQ=255) aatcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATg > 1:3565086‑M2/10‑70 (MQ=255) atcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCa < 1:1054689‑M2/63‑1 (MQ=255) tcatccgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCAt < 1:229553‑M2/64‑1 (MQ=255) cgTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCAt < 1:295193‑M2/64‑1 (MQ=255) gTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATc < 1:1998710‑M2/70‑1 (MQ=255) gTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATc < 1:2330764‑M2/70‑1 (MQ=255) gTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATc < 1:289685‑M2/70‑1 (MQ=255) tAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGtt < 1:656371/45‑1 (MQ=255) tAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCaa < 1:1766309/57‑1 (MQ=255) tAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCaa < 1:1503220/57‑1 (MQ=255) tAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCaa < 1:608590/57‑1 (MQ=255) | ATAGTCTTAATTATCAACCAGGAATCATCTTAGAGCGGATGATTTGCCAAACTGCAAATCATCCGTAGAGAAGGGAAATGGTTAAATGTCAACGACGTGAATGGTGAGTTTACTGTGCTCAAGATGCATCAGATC > minE/882470‑882604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |