| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1281187 = | 66 (1.120) | 6 (0.110) | 3/96 | NT | 8.9% | coding (2966/7104 nt) | yeeJ | adhesin |
| ? | minE | 1281223 = | 60 (1.080) | coding (3002/7104 nt) | yeeJ | adhesin | |||||
ACCCCGTTACTATCCGTCATGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1281256‑1281187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGG > minE/1281223‑1281289 ACCCCGTTACTATCCGTCATGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA > 1:3395100/1‑70 CCCCGTTACTATCCGTCATGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA > 1:1234887/1‑69 CCCCGTTACTATCCGTCATGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA > 1:2007340/1‑69 CCCCGTTACTATCCGTCATGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA > 1:2508567/1‑69 CCCCGTTACTATCCGTCATGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA > 1:2852714/1‑69 TGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA > 1:3334594/1‑51 TCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCAACGGAGGAAAAGGCATGACG < 1:1814002/61‑1 TCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCAACGGAGGAAAAGGCATGACG < 1:93475/61‑1 CTAATCGAGAACTTACTTGCGACGTCGTTTGGCAACGGAGGAAAAGGCATGAC > 1:2108332/1‑53 CTAATCGAGAACTTACTTGCGACGTCGTTTGGCAACGGAGGAAAAGGCATGAC > 1:2111904/1‑53 CTAATCGAGAACTTACTTGCGACGTCGTTTGGCAACGGAGGAAAAGGCATGAC > 1:2857783/1‑53 AATCGAGAACTTACTTGCGACGTCGTTTGGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAA > 1:2844690/1‑71 GCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGG < 1:1263170/70‑1 GCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCT > 1:190577/1‑48 GCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCT > 1:713498/1‑48 GCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCT > 1:982177/1‑48 ACCCCGTTACTATCCGTCATGCCTTTTCCTCCGTTGCTAATCGAGAACTTACTTGCGACGTCGTTTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1281256‑1281187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGG > minE/1281223‑1281289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |