| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1281187 = | 66 (1.120) | 6 (0.110) | 3/96 | NT | 8.9% | coding (2966/7104 nt) | yeeJ | adhesin |
| ? | minE | 1281223 = | 60 (1.080) | coding (3002/7104 nt) | yeeJ | adhesin | |||||
AACCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCACG > minE/1281153‑1281293 | aaCCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCaa > 1:442175/1‑71 (MQ=255)aaCCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCaa < 1:2201430/71‑1 (MQ=255)aaCCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACAACGTCGCAAGTAAGTTCTCGATTAGCaa < 1:933900/71‑1 (MQ=255) aCCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAAc > 1:1071558/1‑71 (MQ=255) aCCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAAc > 1:2380391/1‑71 (MQ=255) aCCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAAc > 1:1608738/1‑71 (MQ=255) cccACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACg > 1:2483851/1‑71 (MQ=255) ccACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACCTCGCAAGTAAGTTCTCGATTAGCAACgg < 1:3704816/71‑1 (MQ=255) cACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACg > 1:1669468/1‑69 (MQ=255) tAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACggagg > 1:3004833/1‑70 (MQ=255) aaaaGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACggagga > 1:2524744/1‑70 (MQ=255) aaaaGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACggag < 1:1882985/68‑1 (MQ=255) aaGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGaaaa < 1:2119142/71‑1 (MQ=255) aaGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGaaaa < 1:893881/71‑1 (MQ=255) aGATAAAGAAATCAGCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAg < 1:692505/71‑1 (MQ=255) aTAAAGAAATCACCTTCTCTGAGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAgg > 1:2110068/1‑70 (MQ=255) cgtcatgccttttcctccgtTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACgga < 1:1814002‑M1/41‑1 (MQ=255) cgtcatgccttttcctccgtTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACgga < 1:93475‑M1/41‑1 (MQ=255) aaGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGaa < 1:2234977/63‑1 (MQ=255) aaGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATg < 1:2538607/71‑1 (MQ=255) aGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAg < 1:3608769/65‑1 (MQ=255) aGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAg < 1:1702570/65‑1 (MQ=255) aGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGa < 1:1267199/71‑1 (MQ=255) gAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCAt > 1:1205213/1‑68 (MQ=255) aaaTCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGc > 1:3116858/1‑65 (MQ=255) aaaTCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACg > 1:3311402/1‑71 (MQ=255) aaaTCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATT‑GCAACGGAGGAAAAGGc > 1:2818184/1‑64 (MQ=255) cACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGa > 1:1309855/1‑69 (MQ=255) cACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGa > 1:2174360/1‑69 (MQ=255) ccTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAg > 1:548078/1‑70 (MQ=255) cTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGt > 1:1953756/1‑70 (MQ=255) cTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGt > 1:1712739/1‑70 (MQ=255) tctcTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAAc > 1:409485/1‑71 (MQ=255) tctcTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAAGCATGACGGATAGTAAc > 1:505150/1‑71 (MQ=255) tccgttgctaatcgagaacttacttgcgacgtcgtttggcaACGGAGGAAAAGGCATGACg < 1:1814002‑M2/20‑1 (MQ=255) tccgttgctaatcgagaacttacttgcgacgtcgtttggcaACGGAGGAAAAGGCATGACg < 1:93475‑M2/20‑1 (MQ=255) tctGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACgg > 1:779674/1‑71 (MQ=255) ctGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACggg > 1:294468/1‑71 (MQ=255) TGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCa > 1:3334594‑M1/1‑51 (MQ=255) TGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACgggg > 1:2852714‑M1/1‑69 (MQ=255) TGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACgggg > 1:2508567‑M1/1‑69 (MQ=255) TGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACgggg > 1:1234887‑M1/1‑69 (MQ=255) TGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACgggg > 1:2007340‑M1/1‑69 (MQ=255) TGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGt > 1:3395100‑M1/1‑70 (MQ=255) ctaatcgagaacttacttgcgacgtcgtttggcaACGGAGGAAAAGGCATGAc > 1:2857783‑M2/35‑53 (MQ=255) ctaatcgagaacttacttgcgacgtcgtttggcaACGGAGGAAAAGGCATGAc > 1:2111904‑M2/35‑53 (MQ=255) ctaatcgagaacttacttgcgacgtcgtttggcaACGGAGGAAAAGGCATGAc > 1:2108332‑M2/35‑53 (MQ=255) cAAACGACGTCGCAAGTAAGTTCTCGATTAGCGACGGAGGAAAAGGCATGACGGATAGt < 1:511397/59‑1 (MQ=255) cAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGt < 1:943769/59‑1 (MQ=255) cAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGt < 1:1861163/59‑1 (MQ=255) cAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGc > 1:3591773/1‑70 (MQ=255) cAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGc > 1:2684279/1‑70 (MQ=255) aatcgagaacttacttgcgacgtcgtttggcaACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCaa > 1:2844690‑M2/33‑71 (MQ=255) aaCGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGAt > 1:476136/1‑54 (MQ=255) aaCGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGAt > 1:452106/1‑54 (MQ=255) aaCGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGAt > 1:2660332/1‑54 (MQ=255) aaCGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACCGATAGTaa > 1:1245437/1‑59 (MQ=255) acgacgTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATc > 1:458816/1‑71 (MQ=255) gacgTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACg < 1:2776770/58‑1 (MQ=255) acgTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGcc < 1:3587302/71‑1 (MQ=255) acgTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGcc < 1:200737/71‑1 (MQ=255) acgTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGcc < 1:693648/71‑1 (MQ=255) acgTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGcc < 1:2161581/71‑1 (MQ=255) cgTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCt < 1:921682/71‑1 (MQ=255) gTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTc > 1:2134869/1‑71 (MQ=255) tCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTcc < 1:2591623/71‑1 (MQ=255) cGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTccc > 1:1418102/1‑71 (MQ=255) cGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTccc > 1:2378121/1‑71 (MQ=255) gCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGAt > 1:520124/1‑45 (MQ=255) gCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCt < 1:2691714/71‑1 (MQ=255) gtaagtTCTCGATTAGCAACGGAGGAAAAGGCATGa > 1:3404374/1‑36 (MQ=255) taagtTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCaa < 1:1469010/56‑1 (MQ=255) taagtTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCaa < 1:940416/56‑1 (MQ=255) agtTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCaa > 1:2444591/1‑54 (MQ=255) agtTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCt > 1:1571490/1‑64 (MQ=255) agtTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCgg > 1:3236893/1‑70 (MQ=255) ttCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCa < 1:3400826/51‑1 (MQ=255) ttCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCa < 1:2554013/51‑1 (MQ=255) ttCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCa < 1:199830/51‑1 (MQ=255) tctcGATTAGCAACGGAGGAAAAGTCATGACGGATAGTAACGGGGTTGCa < 1:2768219/50‑1 (MQ=255) ctcGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACg > 1:2041871/1‑70 (MQ=255) ctcGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGt > 1:2602394/1‑71 (MQ=255) ctcGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGt > 1:1822375/1‑71 (MQ=255) gATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAg < 1:1004954/71‑1 (MQ=255) aTTAGCATCGGAGGAAAAAGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGa < 1:759528/58‑1 (MQ=255) aTTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTg < 1:3395429/57‑1 (MQ=255) aTTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTg < 1:3071177/57‑1 (MQ=255) aTTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGa < 1:1125921/58‑1 (MQ=255) ttAGCAACGGAGGAAAAGGCATGACGGATAGTAACGTGGTTGCa < 1:1425844/44‑1 (MQ=255) ttAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCg < 1:158517/71‑1 (MQ=255) tAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGAc > 1:1299679/1‑57 (MQ=255) gcaACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCt > 1:982177‑M2/4‑48 (MQ=255) gcaACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCt > 1:190577‑M2/4‑48 (MQ=255) gcaACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCt > 1:713498‑M2/4‑48 (MQ=255) gcaACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCggg < 1:1263170‑M2/67‑1 (MQ=255) aCGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGc < 1:2692158/56‑1 (MQ=255) aCGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGc < 1:3105443/56‑1 (MQ=255) aCGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGc < 1:366102/56‑1 (MQ=255) aCGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCACg < 1:2128999/71‑1 (MQ=255) | AACCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCACG > minE/1281153‑1281293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |