| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1975203 | 54 (0.920) | 8 (0.160) | 5/88 | NT | 13.8% | intergenic (+349/‑75) | metK/galP | methionine adenosyltransferase 1/D‑galactose transporter |
| ? | minE | = 1975209 | 53 (1.040) | intergenic (+355/‑69) | metK/galP | methionine adenosyltransferase 1/D‑galactose transporter | |||||
TGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1975127‑1975203‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgtgaAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAATAA < minE/1975209‑1975140 TGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTG < 1:2666599/71‑1TGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTG < 1:2743748/71‑1TGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTG < 1:2748162/71‑1 GATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTG < 1:2827712/70‑1 TAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGT > 1:771275/1‑70 AACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGA > 1:961489/1‑71 ATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGAAGCAAATCA > 1:3557599/1‑71 CACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGAAGCAAATCACATCAGTG > 1:2565652/1‑70 CACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGAAGCAAATCACATCAGTG > 1:2801377/1‑70 CACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGAAGCAAATCACATCAGTG < 1:2925221/70‑1 CACTTAAATCATAACTAAGATAAATGTTAGTGTAAACGATTACACTGATGTGAAGCAAATCACATCAGTG < 1:660008/70‑1 CATAACTAAGATAAATGTTAGTGTAAGCGATTACACTG < 1:1778305/38‑1 ATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGAAGCAAATC > 1:1285722/1‑51 AACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGAAGCAAATCACATCAGT > 1:2981804/1‑57 AACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGAAGCAAATCACATCAGT > 1:1684537/1‑57 GTGAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAA > 1:306606/1‑71 TGAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAAT < 1:624401/71‑1 TGAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAAT < 1:1581128/71‑1 TGAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAA < 1:3296693/70‑1 TGAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAA < 1:3450576/70‑1 TGAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAA < 1:3670530/70‑1 GAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAAT > 1:450270/1‑70 GAAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAA > 1:445980/1‑69 AAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAATAA < 1:1518405/71‑1 AAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGA < 1:668662/65‑1 TGATATAACTCAATTATTTTCATGCACTTAAATCATAACTAAGATAAATGTTAGTGTAAGCGATTACACTGATGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1975127‑1975203‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgtgaAGCAAATCACATCAGTGTAATCGCTTACACTAACATTTATCTTAGTTATGATTTAAGTGCATGAAAATAA < minE/1975209‑1975140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |