| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2275478 = | NA (NA) | 7 (0.130) | 5/90 | NT | 100% | noncoding (251/1542 nt) | rrsB | 16S ribosomal RNA |
| ? | minE | 2362809 = | 0 (0.000) | noncoding (274/1542 nt) | rrsA | 16S ribosomal RNA | |||||
ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGtaggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2275547‑2275478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTACCCCT > minE/2362809‑2362884 ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGT < 1:2651544/71‑1 CGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTA < 1:2772759/71‑1 CGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTA < 1:2143265/71‑1 TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:1256966/71‑1 TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:233023/71‑1 TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG < 1:2134419/71‑1 TCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG > 1:2123869/1‑71 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:305799/70‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:2797394/70‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:2114199/70‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:453688/70‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:1935485/70‑1 GCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:701373/70‑1 GACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGt > 1:2855211/1‑67 ACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTG > 1:1330101/1‑66 GAGGGGGACCTTCGGGCCTCATGCCATCGGATGTGCCCAGATGGGATTAGCTAGT > 1:659123/1‑55 AGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTG > 1:3544171/1‑59 GGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGT < 1:2431237/54‑1 ACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACCTAC < 1:306347/71‑1 TCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCAC < 1:1958775/63‑1 TCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACCTA > 1:3567918/1‑66 TCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACCTA > 1:2396280/1‑66 TTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG > 1:1081557/1‑38 TTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGG > 1:727157/1‑38 TTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGG > 1:342668/1‑38 CCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCC < 1:3488529/48‑1 CCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCC < 1:3013496/48‑1 CGGATGTGCCCAGATGGGATTAGCTAGTAGGTGAGCCGTTACCCCACC > 1:3545161/1‑48 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGC > 1:3357367/1‑62 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGAT > 1:1533385/1‑52 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGG < 1:2592392/42‑1 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGG < 1:1600782/42‑1 TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATC < 1:1168467/38‑1 AGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGG > 1:2203266/1‑41 AGGTGAGCCGTTACCCCACCTACTAGCTAATCCAATCTGGG > 1:3157235/1‑41 GGTGATCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCTGATGGCAAGAG < 1:203991/58‑1 GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCTGATGGCAAGAG < 1:887921/58‑1 GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTACC < 1:1841886/71‑1 GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCA > 1:2377147/1‑42 GGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCA > 1:2358132/1‑42 GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTACCC > 1:2290144/1‑71 GTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCC < 1:1930018/46‑1 TGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCTGAT < 1:2310665/48‑1 TGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGG < 1:2582264/38‑1 GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTACCCCT > 1:1376249/1‑71 GAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATC > 1:1782697/1‑43 ACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGtaggtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2275547‑2275478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTACCCCT > minE/2362809‑2362884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |