| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2275478 = | NA (NA) | 7 (0.130) | 5/90 | NT | 100% | noncoding (251/1542 nt) | rrsB | 16S ribosomal RNA |
| ? | minE | 2362809 = | 0 (0.000) | noncoding (274/1542 nt) | rrsA | 16S ribosomal RNA | |||||
TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGC > minE/2362739‑2362870 | acgtcgcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagt < 1:2651544‑M2/1‑1 (MQ=255) cgtcgcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagta < 1:2772759‑M2/2‑1 (MQ=255) cgtcgcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagta < 1:2143265‑M2/2‑1 (MQ=255) tcgcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAgg < 1:1256966‑M2/4‑1 (MQ=255) tcgcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAgg < 1:233023‑M2/4‑1 (MQ=255) tcgcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAgg < 1:2134419‑M2/4‑1 (MQ=255) tcgcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAgg > 1:2123869‑M2/68‑71 (MQ=255) gcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGt < 1:2114199‑M2/5‑1 (MQ=255) gcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGt < 1:453688‑M2/5‑1 (MQ=255) gcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGt < 1:2797394‑M2/5‑1 (MQ=255) gcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGt < 1:1935485‑M2/5‑1 (MQ=255) gcaagaccaaagagggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGt < 1:305799‑M2/5‑1 (MQ=255) gcaagaccaaagagggggaccttcgggcctcttgccatcagatgtgcccagatgggattagctagTAGGt < 1:701373‑M2/5‑1 (MQ=255) gaccaaagagggggaccttcgggcctcttgccatcagatgtgcccagatgggattagctagTAGGtgt > 1:2855211‑M2/62‑67 (MQ=255) accaaagagggggaccttcgggcctcttgccatcagatgtgcccagatgggattagctagTAGGTg > 1:1330101‑M2/61‑66 (MQ=255) gagggggaccttcgggcctcatgccatcggatgtgcccagatgggattagctagt > 1:659123‑M2/55‑55 (MQ=255) agggggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGTg > 1:3544171‑M2/54‑59 (MQ=255) ggaccttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGt < 1:2431237‑M2/5‑1 (MQ=255) accttcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGTGAGCCGTTACCCCACctac < 1:306347‑M2/24‑1 (MQ=255) tcgggcctcttgccatcggatgtgcccagatgggattagctagTAGGTGAGCCGTTACCCCAc < 1:1958775‑M2/20‑1 (MQ=255) tcgggcctcttgccatcagatgtgcccagatgggattagctagTAGGTGAGCCGTTACCCCACcta > 1:2396280‑M2/44‑66 (MQ=255) tcgggcctcttgccatcagatgtgcccagatgggattagctagTAGGTGAGCCGTTACCCCACcta > 1:3567918‑M2/44‑66 (MQ=255) ttgccatcggatgtgcccagatgggattagctagTAgg > 1:1081557‑M2/35‑38 (MQ=255) ttgccatcggatgtgcccagatgggattagctagTAgg > 1:727157‑M2/35‑38 (MQ=255) ttgccatcagatgtgcccagatgggattagctagTAgg > 1:342668‑M2/35‑38 (MQ=255) ccatcggatgtgcccagatgggattagctagTAGGTGAGCCGTTAccc < 1:3488529‑M2/17‑1 (MQ=255) ccatcggatgtgcccagatgggattagctagTAGGTGAGCCGTTAccc < 1:3013496‑M2/17‑1 (MQ=255) cggatgtgcccagatgggattagctagTAGGTGAGCCGTTACCCCAcc > 1:3545161‑M2/28‑48 (MQ=255) TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATc < 1:1168467‑M2/38‑1 (MQ=255) TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTggg < 1:2592392‑M2/42‑1 (MQ=255) TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTggg < 1:1600782‑M2/42‑1 (MQ=255) TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGAt > 1:1533385‑M2/1‑52 (MQ=255) TAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGc > 1:3357367‑M2/1‑62 (MQ=255) | TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGC > minE/2362739‑2362870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |