| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2295682 = | 53 (0.900) | 10 (0.180) | 5/96 | NT | 17.4% | coding (116/906 nt) | yijE | predicted permease |
| ? | minE | 2295707 = | 45 (0.810) | coding (91/906 nt) | yijE | predicted permease | |||||
TGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2295754‑2295682‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGC > minE/2295707‑2295767 TGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCC > 1:790678/1‑71 GGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCC < 1:1642609/38‑1 GGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCC < 1:2310107/38‑1 AGCAAGTCACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCAC < 1:507131/71‑1 GCAAGTCACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCAC > 1:1610398/1‑70 GCAAGTCACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCAC > 1:1616773/1‑70 GCAAGTCACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCAC > 1:3732732/1‑70 GCAAGTCACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCAC > 1:632765/1‑70 AGTCACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAAC > 1:445376/1‑70 TCACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAG > 1:387988/1‑71 ACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCA < 1:1927630/36‑1 ACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCA < 1:2723233/36‑1 ACCAGTTACATCGGTGCCTTGCTTCATGAAAATCCA < 1:347415/36‑1 CTTGCTTCATGAAAATCCAGCTATAACTCCATATAAGTGTGAGCACAACCAGGCCACTGATTGC < 1:3173938/64‑1 TGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2295754‑2295682‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGC > minE/2295707‑2295767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |