| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2295682 = | 53 (0.900) | 10 (0.180) | 5/96 | NT | 17.4% | coding (116/906 nt) | yijE | predicted permease |
| ? | minE | 2295707 = | 45 (0.810) | coding (91/906 nt) | yijE | predicted permease | |||||
TAAAACGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGTTG > minE/2295639‑2295777 | tAAAACGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCt > 1:2660899/1‑71 (MQ=255)tAAAACGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCt > 1:3291263/1‑71 (MQ=255)tAAAACGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCt < 1:396937/71‑1 (MQ=255)gtgctcacacttatctggagttatagctggattttcatgaagcAAGGCACCGATGTAACTGGTGACTTGc > 1:3732732‑M1/44‑70 (MQ=255)gtgctcacacttatctggagttatagctggattttcatgaagcAAGGCACCGATGTAACTGGTGACTTGc > 1:1610398‑M1/44‑70 (MQ=255)gtgctcacacttatctggagttatagctggattttcatgaagcAAGGCACCGATGTAACTGGTGACTTGc > 1:632765‑M1/44‑70 (MQ=255)gtgctcacacttatctggagttatagctggattttcatgaagcAAGGCACCGATGTAACTGGTGACTTGc > 1:1616773‑M1/44‑70 (MQ=255)gtgctcacacttatctggagttatagctggattttcatgaagcAAGGCACCGATGTAACTGGTGACTTGCt < 1:507131‑M1/28‑1 (MQ=255) aaaCGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCtt < 1:1160464/70‑1 (MQ=255) aaCGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCa > 1:2083981/1‑71 (MQ=255) aCGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCAt > 1:2894249/1‑71 (MQ=255) aCGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCAt > 1:1358140/1‑71 (MQ=255) cGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCAt > 1:2656571/1‑70 (MQ=255) agagCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATgta < 1:360121/71‑3 (MQ=255) gagCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaaa < 1:599610/71‑1 (MQ=255) gagCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaa > 1:480387/1‑70 (MQ=255) gcCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATc < 1:3036995/70‑1 (MQ=255) cGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAg < 1:3001180/71‑1 (MQ=255) gAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaa < 1:1038920/63‑1 (MQ=255) aaaaTGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTg < 1:945358/53‑1 (MQ=255) aaaaTGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaa < 1:2096693/62‑1 (MQ=255) aaaaTGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaa < 1:359063/62‑1 (MQ=255) aaaaTGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGc > 1:2965241/1‑70 (MQ=255) aaaaTGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGc > 1:895431/1‑70 (MQ=255) aaTGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaaaa > 1:3220290/1‑62 (MQ=255) aGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACt > 1:1947276/1‑70 (MQ=255) aGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTc > 1:79162/1‑71 (MQ=255) cGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTc > 1:736936/1‑69 (MQ=255) cGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTc > 1:831431/1‑69 (MQ=255) cGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCa < 1:384533/71‑1 (MQ=255) cGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaa < 1:3306562/46‑1 (MQ=255) ggTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGaaaa < 1:3351351/47‑1 (MQ=255) gTAAAGTCGAACGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCa < 1:1024346/50‑1 (MQ=255) tAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATgta < 1:355713/43‑3 (MQ=255) tAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAgtgt > 1:2890239/1‑70 (MQ=255) aaGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGa > 1:2768317/1‑40 (MQ=255) aaGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAg > 1:1012762/1‑71 (MQ=255) aaGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAg > 1:2260914/1‑71 (MQ=255) tCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGtgtg < 1:3714648/66‑1 (MQ=255) tCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGtgtg < 1:2359729/66‑1 (MQ=255) agcaagtcaccagttacatcggtgccttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGcac < 1:507131‑M2/43‑1 (MQ=255) gcaagtcaccagttacatcggtgccttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGcac > 1:3732732‑M2/28‑70 (MQ=255) gcaagtcaccagttacatcggtgccttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGcac > 1:1616773‑M2/28‑70 (MQ=255) gcaagtcaccagttacatcggtgccttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGcac > 1:632765‑M2/28‑70 (MQ=255) gcaagtcaccagttacatcggtgccttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGcac > 1:1610398‑M2/28‑70 (MQ=255) gAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACaa > 1:854043/1‑71 (MQ=255) agtcaccagttacatcggtgccttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAAc > 1:445376‑M2/25‑70 (MQ=255) GGCACCGATGTAACTGGTGACTTGCTTCATGAAAATcc < 1:1642609‑M1/38‑1 (MQ=255) GGCACCGATGTAACTGGTGACTTGCTTCATGAAAATcc < 1:2310107‑M1/38‑1 (MQ=255) GGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCa > 1:790678‑M1/1‑71 (MQ=255) tcaccagttacatcggtgccttGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAg > 1:387988‑M2/23‑71 (MQ=255) accagttacatcggtgccttGCTTCATGAAAATCCa < 1:347415‑M2/16‑1 (MQ=255) accagttacatcggtgccttGCTTCATGAAAATCCa < 1:2723233‑M2/16‑1 (MQ=255) accagttacatcggtgccttGCTTCATGAAAATCCa < 1:1927630‑M2/16‑1 (MQ=255) cGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGc > 1:628993/1‑69 (MQ=255) cGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCa > 1:83478/1‑71 (MQ=255) gATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCAc > 1:2126745/1‑71 (MQ=255) gTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAg > 1:3036343/1‑54 (MQ=255) gTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCAc > 1:626865/1‑68 (MQ=255) gTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCAc > 1:1910143/1‑68 (MQ=255) gTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCAc > 1:2027934/1‑68 (MQ=255) gTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCAc > 1:3708026/1‑68 (MQ=255) tAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAgt > 1:652856/1‑48 (MQ=255) tAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAgt > 1:1110281/1‑48 (MQ=255) tAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAgt > 1:2170932/1‑48 (MQ=255) tAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGtgtg < 1:432296/51‑1 (MQ=255) aCTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTg > 1:931091/1‑71 (MQ=255) cTGGTGACTTGCTTCATGAAAATCAAGCTATAACTCCAGAt < 1:3352757/41‑1 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATaa > 1:940129/1‑41 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATa > 1:2616482/1‑40 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATa > 1:1176527/1‑40 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATa > 1:2146623/1‑40 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATa > 1:3294618/1‑40 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATa > 1:2152040/1‑40 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCa > 1:2862429/1‑61 (MQ=255) ggTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCa > 1:3097397/1‑61 (MQ=255) gTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGcc < 1:1869847/69‑1 (MQ=255) gTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCa < 1:706765/70‑1 (MQ=255) tGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGAt < 1:3685616/64‑1 (MQ=255) gACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTg > 1:2956991/1‑71 (MQ=255) aCTTGCTTCATGAGAATCCAGCTATAACTCCAGATAAGTGTGAGCACAAc < 1:3430370/50‑1 (MQ=255) aCTTGCTTCATGAAAATCCAGCTATAACTCCAGATaa < 1:162726/37‑1 (MQ=255) aCTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGAtt > 1:3007021/1‑63 (MQ=255) cttGCTTCATGAAAATCCAGCTATAACTCCATATAAGTGTGAGCACAACCAGGCCACTGATTGc < 1:3173938‑M2/61‑1 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGtgtg < 1:1587701/38‑1 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGtt < 1:2534074/70‑1 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGtt < 1:770371/70‑1 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGtt < 1:3725591/70‑1 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGt < 1:1043766/69‑1 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGt < 1:2139259/69‑1 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGTTg > 1:3233724/1‑71 (MQ=255) gCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGTTg > 1:2432582/1‑71 (MQ=255) | TAAAACGAGAGCGCCGAAAATGCAGCGTAAGGCGGTAAAGTCGAAGGCACCGATGTAACTGGTGACTTGCTTCATGAAAATCCAGCTATAACTCCAGATAAGTGTGAGCACAACCAGGCCACTGATTGCCAGTGGGTTG > minE/2295639‑2295777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |